Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ube3bQ9ES34 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ube3bQ9ES34 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ube3bQ9ES34 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ube3bQ9ES34 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ube3bQ9ES34 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm15215-201ENSMUST00000117773 489 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm12293-201ENSMUST00000121898 590 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm22940-201ENSMUST00000158560 155 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm8941-201ENSMUST00000181451 899 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm29124-201ENSMUST00000186576 452 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm45048-201ENSMUST00000207058 429 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm18850-201ENSMUST00000211578 388 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm7368-201ENSMUST00000213307 367 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 AC161586.1-201ENSMUST00000223232 547 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 CT010454.1-201ENSMUST00000225975 265 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 AC155167.1-201ENSMUST00000228931 614 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm23624-201ENSMUST00000082463 321 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm23515-201ENSMUST00000082829 107 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm22572-201ENSMUST00000082985 105 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Mir143-201ENSMUST00000083511 63 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Gm43611-201ENSMUST00000196656 4352 ntBASIC7.09□□□□□ -1.27
Ube3bQ9ES34 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Ube3bQ9ES34 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC7.09□□□□□ -1.28
Ube3bQ9ES34 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.09□□□□□ -1.28
Ube3bQ9ES34 Gm44416-201ENSMUST00000204055 2066 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm24586-201ENSMUST00000116695 89 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Mir466f-4-201ENSMUST00000116930 121 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm14428-201ENSMUST00000120408 822 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm22482-201ENSMUST00000122563 359 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm23124-201ENSMUST00000157650 107 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm25439-201ENSMUST00000158280 131 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm25445-201ENSMUST00000158996 299 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm23793-201ENSMUST00000179396 117 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm23648-201ENSMUST00000180301 107 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm27024-201ENSMUST00000182561 755 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm44938-201ENSMUST00000208614 427 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm8523-201ENSMUST00000211386 552 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Clec2j-201ENSMUST00000032517 515 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm5321-201ENSMUST00000072050 447 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm23506-201ENSMUST00000083077 107 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 AC167013.5-201ENSMUST00000227597 2947 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 AC121598.3-201ENSMUST00000227179 1643 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Gm4541-201ENSMUST00000208901 1848 ntBASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ube3bQ9ES34 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms