Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm11878-201ENSMUST00000117908 400 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm13865-201ENSMUST00000120957 865 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm23179-201ENSMUST00000158693 304 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm3091-201ENSMUST00000163408 484 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Mir3062-201ENSMUST00000174986 105 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm27896-201ENSMUST00000175162 317 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm27568-201ENSMUST00000184220 99 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm18181-201ENSMUST00000190670 736 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm4290-201ENSMUST00000206897 814 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm44681-201ENSMUST00000208447 842 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm6988-201ENSMUST00000222676 375 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Mecom-201ENSMUST00000061088 348 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Lima1Q9ERG0 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm23424-201ENSMUST00000103889 110 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm4487-201ENSMUST00000150617 442 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm22536-201ENSMUST00000158171 134 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm25603-201ENSMUST00000158361 105 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm4222-201ENSMUST00000165784 470 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm28094-201ENSMUST00000185262 390 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm8282-201ENSMUST00000187559 483 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm4734-201ENSMUST00000200117 777 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm2691-201ENSMUST00000203205 901 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm44604-201ENSMUST00000205475 496 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm19269-201ENSMUST00000211401 804 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm19073-201ENSMUST00000219978 555 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Lima1Q9ERG0 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm15426-201ENSMUST00000117823 556 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm11633-201ENSMUST00000118176 444 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm8200-201ENSMUST00000122390 222 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm24441-201ENSMUST00000157235 281 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms