Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm6863-201ENSMUST00000052882 636 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Smc1aQ9CU62 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Smc1aQ9CU62 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Mir761-201ENSMUST00000103245 76 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Gm14706-201ENSMUST00000117744 255 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5□□□□□ -1.61
Smc1aQ9CU62 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5□□□□□ -1.61
Smc1aQ9CU62 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Gm27315-201ENSMUST00000183977 154 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5□□□□□ -1.61
Smc1aQ9CU62 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC5□□□□□ -1.61
Smc1aQ9CU62 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Gm21742-201ENSMUST00000189352 548 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5□□□□□ -1.61
Smc1aQ9CU62 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Gm39197-201ENSMUST00000212069 457 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Gm19170-201ENSMUST00000212440 1084 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Smc1aQ9CU62 AC165437.1-201ENSMUST00000228640 536 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5□□□□□ -1.61
Smc1aQ9CU62 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Gm23464-201ENSMUST00000083145 147 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Smc1aQ9CU62 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Smc1aQ9CU62 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5□□□□□ -1.61
Smc1aQ9CU62 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Gm44860-201ENSMUST00000208473 2346 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Gm43594-201ENSMUST00000201153 3442 ntBASIC5□□□□□ -1.61
Smc1aQ9CU62 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Smc1aQ9CU62 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm14786-201ENSMUST00000117127 944 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm9308-201ENSMUST00000119073 448 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm14126-201ENSMUST00000122345 395 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm23465-201ENSMUST00000157134 262 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm26347-201ENSMUST00000157526 131 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm25332-201ENSMUST00000158038 105 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm25447-201ENSMUST00000158997 128 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm15796-201ENSMUST00000162135 204 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm21070-201ENSMUST00000182425 985 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm4854-201ENSMUST00000185902 574 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm28625-201ENSMUST00000188309 205 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm38008-201ENSMUST00000195333 518 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm43124-201ENSMUST00000201878 278 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm17811-201ENSMUST00000206193 387 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm45081-201ENSMUST00000206281 572 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Snord22-201ENSMUST00000083153 126 ntBASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Smc1aQ9CU62 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Smc1aQ9CU62 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Smc1aQ9CU62 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.98□□□□□ -1.61
Smc1aQ9CU62 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 236.9 ms