Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.09□□□□□ -1.75
Use1Q9CQ56 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Use1Q9CQ56 Gm43037-201ENSMUST00000196808 250 ntBASIC4.09□□□□□ -1.75
Use1Q9CQ56 Gm42566-201ENSMUST00000197120 643 ntBASIC4.09□□□□□ -1.75
Use1Q9CQ56 Gm44330-201ENSMUST00000200106 143 ntBASIC4.09□□□□□ -1.75
Use1Q9CQ56 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.09□□□□□ -1.75
Use1Q9CQ56 Gm19366-201ENSMUST00000206996 156 ntBASIC4.09□□□□□ -1.75
Use1Q9CQ56 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.09□□□□□ -1.75
Use1Q9CQ56 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Use1Q9CQ56 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.09□□□□□ -1.75
Use1Q9CQ56 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Use1Q9CQ56 Olfr480-201ENSMUST00000071658 1029 ntBASIC4.09□□□□□ -1.75
Use1Q9CQ56 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Use1Q9CQ56 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Use1Q9CQ56 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.09□□□□□ -1.75
Use1Q9CQ56 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Use1Q9CQ56 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.09□□□□□ -1.75
Use1Q9CQ56 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Use1Q9CQ56 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Use1Q9CQ56 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Use1Q9CQ56 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Use1Q9CQ56 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Use1Q9CQ56 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC4.09□□□□□ -1.76
Use1Q9CQ56 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Lipe-203ENSMUST00000105177 1251 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm15933-201ENSMUST00000117215 616 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm15148-201ENSMUST00000117602 156 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm12112-201ENSMUST00000117772 231 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm11398-201ENSMUST00000120330 320 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm6373-201ENSMUST00000121026 360 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm5353-201ENSMUST00000139800 793 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.08□□□□□ -1.76
Use1Q9CQ56 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm26034-201ENSMUST00000158154 116 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm15838-201ENSMUST00000161575 180 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm5263-201ENSMUST00000163646 601 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm28190-201ENSMUST00000189766 722 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm22897-201ENSMUST00000197860 128 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm43090-201ENSMUST00000202459 314 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm45499-201ENSMUST00000211656 280 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm7588-201ENSMUST00000216866 571 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 AC164424.1-201ENSMUST00000221690 170 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 AC158142.3-201ENSMUST00000226230 675 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.08□□□□□ -1.76
Use1Q9CQ56 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Use1Q9CQ56 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Use1Q9CQ56 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm12757-201ENSMUST00000119465 800 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm13932-201ENSMUST00000120873 610 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm5924-201ENSMUST00000132554 871 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm4487-201ENSMUST00000150617 442 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Mir5110-201ENSMUST00000175537 87 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Mir7037-201ENSMUST00000184414 65 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm5252-201ENSMUST00000189030 909 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm43856-201ENSMUST00000197004 369 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm6719-201ENSMUST00000202067 335 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm43028-201ENSMUST00000202561 481 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm44002-201ENSMUST00000205134 594 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Use1Q9CQ56 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms