Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm25758-201ENSMUST00000103987 129 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm24835-201ENSMUST00000116777 111 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm12294-201ENSMUST00000119723 490 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm12074-201ENSMUST00000120189 219 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm14679-201ENSMUST00000121536 722 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm24295-201ENSMUST00000158298 131 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm24550-201ENSMUST00000158648 279 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm23774-201ENSMUST00000158990 131 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm23806-201ENSMUST00000175157 109 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm25397-201ENSMUST00000176951 92 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm38291-201ENSMUST00000193671 259 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm18036-201ENSMUST00000195256 272 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm43652-201ENSMUST00000196219 675 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Igkv15-97-201ENSMUST00000197637 339 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm44348-201ENSMUST00000200165 122 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.24□□□□□ -1.41
Clp1Q99LI9 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 AC125531.1-201ENSMUST00000219849 221 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 AC125484.1-201ENSMUST00000223218 234 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm2645-201ENSMUST00000223516 547 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm25512-201ENSMUST00000083863 107 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Clp1Q99LI9 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.24□□□□□ -1.41
Clp1Q99LI9 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm24789-201ENSMUST00000104282 131 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm14755-201ENSMUST00000118037 384 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm12515-201ENSMUST00000120116 361 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm15501-202ENSMUST00000140687 625 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm22563-201ENSMUST00000157333 269 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm24940-201ENSMUST00000158326 108 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm17511-201ENSMUST00000172206 342 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm25194-201ENSMUST00000177987 79 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm29045-201ENSMUST00000187278 698 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm29376-201ENSMUST00000189357 835 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm44330-201ENSMUST00000200106 143 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm18696-201ENSMUST00000220103 274 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 AC104832.1-201ENSMUST00000222938 550 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 AL662807.1-201ENSMUST00000224183 126 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 AC158142.2-201ENSMUST00000227892 635 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm23939-201ENSMUST00000082880 133 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.23□□□□□ -1.41
Clp1Q99LI9 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Clp1Q99LI9 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.22□□□□□ -1.41
Clp1Q99LI9 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clp1Q99LI9 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms