Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm23879-201ENSMUST00000116874 126 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm15603-201ENSMUST00000119252 492 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm11262-201ENSMUST00000119326 833 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm14788-201ENSMUST00000119457 375 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Clec2f-201ENSMUST00000121051 374 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm15141-201ENSMUST00000121860 729 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm13745-201ENSMUST00000121994 527 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm14122-201ENSMUST00000122076 973 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm24113-201ENSMUST00000157477 276 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm27896-201ENSMUST00000175162 317 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm19214-201ENSMUST00000191956 1083 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm44234-201ENSMUST00000204246 900 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm19096-201ENSMUST00000209705 766 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm5358-201ENSMUST00000212814 353 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm37407-201ENSMUST00000194793 1316 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Lsm1Q8VC85 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm22473-201ENSMUST00000104114 132 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm23608-201ENSMUST00000104545 128 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm11432-201ENSMUST00000117334 231 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm15766-201ENSMUST00000118025 813 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm14229-201ENSMUST00000121178 850 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm8200-201ENSMUST00000122390 222 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm17086-201ENSMUST00000171346 484 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm38332-201ENSMUST00000194189 147 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm4410-201ENSMUST00000199349 686 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm19366-201ENSMUST00000206996 156 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 AV026068-224ENSMUST00000224827 928 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm18493-201ENSMUST00000192084 1612 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.12□□□□□ -1.75
Lsm1Q8VC85 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm11350-201ENSMUST00000121436 870 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm12340-201ENSMUST00000121617 462 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm26310-201ENSMUST00000157766 117 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm27864-201ENSMUST00000183704 190 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms