Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm19131-201ENSMUST00000203408 789 ntBASIC5.22□□□□□ -1.57
Nup88Q8CEC0 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
Nup88Q8CEC0 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Nup88Q8CEC0 CT030194.1-201ENSMUST00000225507 532 ntBASIC5.22□□□□□ -1.57
Nup88Q8CEC0 Mir202-201ENSMUST00000083568 72 ntBASIC5.22□□□□□ -1.57
Nup88Q8CEC0 Mir215-201ENSMUST00000083628 112 ntBASIC5.22□□□□□ -1.57
Nup88Q8CEC0 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Nup88Q8CEC0 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.21□□□□□ -1.57
Nup88Q8CEC0 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Nup88Q8CEC0 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Nup88Q8CEC0 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm14500-201ENSMUST00000121647 113 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm26993-201ENSMUST00000182766 789 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm29534-201ENSMUST00000187328 382 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm37601-201ENSMUST00000194922 394 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm46138-201ENSMUST00000215294 426 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 CT009765.2-201ENSMUST00000221331 392 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 AC156025.1-201ENSMUST00000223597 3551 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Gm28362-201ENSMUST00000189430 2420 ntBASIC5.21□□□□□ -1.58
Nup88Q8CEC0 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.2□□□□□ -1.58
Nup88Q8CEC0 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm23942-201ENSMUST00000101956 107 ntBASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm12852-201ENSMUST00000119478 719 ntBASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm42593-201ENSMUST00000198469 377 ntBASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm44054-201ENSMUST00000203814 372 ntBASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Nup88Q8CEC0 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Mir105-201ENSMUST00000104655 80 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm8475-201ENSMUST00000118211 526 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm15493-201ENSMUST00000119461 528 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm11448-201ENSMUST00000120427 450 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm8051-201ENSMUST00000120464 466 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm14623-201ENSMUST00000121398 603 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm22111-201ENSMUST00000178010 79 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm23687-201ENSMUST00000178664 79 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm24566-201ENSMUST00000179286 79 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm23305-201ENSMUST00000179342 79 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm26389-201ENSMUST00000179819 79 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm22130-201ENSMUST00000179979 79 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm22393-201ENSMUST00000180153 79 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm25085-201ENSMUST00000180298 79 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Gm27976-201ENSMUST00000183635 162 ntBASIC5.19□□□□□ -1.58
Nup88Q8CEC0 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms