Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Atg4aQ8C9S8 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm24855-201ENSMUST00000104848 97 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm16359-201ENSMUST00000124511 289 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm3025-201ENSMUST00000163454 489 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm2878-201ENSMUST00000170173 486 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm27414-201ENSMUST00000185033 381 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm29634-201ENSMUST00000188467 696 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm28699-201ENSMUST00000189193 696 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm37708-201ENSMUST00000192337 895 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm36259-201ENSMUST00000197340 392 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm42579-201ENSMUST00000200512 734 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm9245-201ENSMUST00000200528 983 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm19131-201ENSMUST00000203408 789 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 AC158631.2-201ENSMUST00000219999 478 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Mir383-201ENSMUST00000083523 70 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.11□□□□□ -1.59
Atg4aQ8C9S8 Gm37011-201ENSMUST00000195543 2935 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm25317-201ENSMUST00000116824 129 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm14365-201ENSMUST00000117535 587 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm11262-201ENSMUST00000119326 833 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm11448-201ENSMUST00000120427 450 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm25295-201ENSMUST00000122794 306 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm24854-201ENSMUST00000158025 98 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm36638-201ENSMUST00000193295 400 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm37088-201ENSMUST00000193887 406 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Ighv8-1-201ENSMUST00000194897 291 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm43855-201ENSMUST00000197462 507 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm45209-201ENSMUST00000207122 353 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm45269-201ENSMUST00000210359 282 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Platr25-208ENSMUST00000222602 939 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Atg4aQ8C9S8 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Gm12807-201ENSMUST00000121546 962 ntBASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.09□□□□□ -1.59
Atg4aQ8C9S8 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms