Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Gm43424-201ENSMUST00000200484 253 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Gm45245-201ENSMUST00000210082 376 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Gm19219-201ENSMUST00000215863 724 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Gm12582-201ENSMUST00000030555 697 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Gm43462-201ENSMUST00000200265 3648 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Mir105-201ENSMUST00000104655 80 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Gm12978-201ENSMUST00000121250 522 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Gm13852-201ENSMUST00000122350 242 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col6a6Q8C6K9 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm3788-201ENSMUST00000119949 136 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Mir7578-201ENSMUST00000183455 82 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm37050-201ENSMUST00000193464 466 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 AC133189.1-201ENSMUST00000198820 140 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm23925-201ENSMUST00000082471 132 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Mir34b-201ENSMUST00000083558 84 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 AC153912.2-201ENSMUST00000215840 2015 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm43389-201ENSMUST00000196080 2595 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm11372-201ENSMUST00000117348 570 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm15553-201ENSMUST00000118757 430 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm25714-201ENSMUST00000158626 296 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm38234-201ENSMUST00000195204 421 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.63□□□□□ -1.83
Col6a6Q8C6K9 Gm5117-201ENSMUST00000178878 2553 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm44587-201ENSMUST00000207399 1685 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm5258-201ENSMUST00000165437 327 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm19503-201ENSMUST00000187109 241 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm37030-201ENSMUST00000194254 295 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm19908-201ENSMUST00000204684 391 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm9712-201ENSMUST00000210842 311 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms