Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm9890-201ENSMUST00000171867 537 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm18560-201ENSMUST00000173463 1123 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm27427-201ENSMUST00000185134 193 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm38234-201ENSMUST00000195204 421 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm17954-201ENSMUST00000195893 607 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm18258-201ENSMUST00000210413 542 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc40Q8BI79 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm12186-201ENSMUST00000119050 945 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm6565-201ENSMUST00000121217 438 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm8069-201ENSMUST00000197887 154 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm31532-201ENSMUST00000203555 767 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm36247-201ENSMUST00000211834 285 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm7439-201ENSMUST00000214053 835 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Supt4b-201ENSMUST00000214434 351 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm18442-201ENSMUST00000220925 639 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Mir342-201ENSMUST00000083502 99 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Gm6361-201ENSMUST00000091031 435 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.7□□□□□ -1.66
Ccdc40Q8BI79 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm11408-201ENSMUST00000117889 519 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm5754-201ENSMUST00000118774 892 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm12311-201ENSMUST00000118803 374 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm5391-201ENSMUST00000121155 613 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm3362-201ENSMUST00000148102 466 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm24689-201ENSMUST00000157760 104 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Mir7022-201ENSMUST00000183749 61 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm28500-201ENSMUST00000190286 151 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm44474-201ENSMUST00000196525 127 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm5309-201ENSMUST00000197416 677 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm45078-201ENSMUST00000205343 546 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm45006-201ENSMUST00000206078 690 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Gm18306-201ENSMUST00000207338 569 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.69□□□□□ -1.66
Ccdc40Q8BI79 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms