Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim28Q62318 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim28Q62318 Gm37964-201ENSMUST00000192459 4905 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trim28Q62318 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Trim28Q62318 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Trim28Q62318 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trim28Q62318 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim28Q62318 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim28Q62318 Gm6884-201ENSMUST00000119318 615 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Gm12852-201ENSMUST00000119478 719 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim28Q62318 Gm14369-201ENSMUST00000121355 285 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Gm24507-201ENSMUST00000157683 134 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Gm24393-201ENSMUST00000158135 97 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Trim28Q62318 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim28Q62318 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim28Q62318 Gm22243-201ENSMUST00000178754 120 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim28Q62318 Dlx6os1-204ENSMUST00000184182 146 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim28Q62318 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim28Q62318 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim28Q62318 Gm28927-201ENSMUST00000191528 272 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Gm38307-201ENSMUST00000195630 1840 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Trim28Q62318 Gm38395-201ENSMUST00000199904 830 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Gm17956-201ENSMUST00000199931 838 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim28Q62318 Gm20074-201ENSMUST00000208144 484 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Trim28Q62318 AL772397.1-201ENSMUST00000216707 606 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim28Q62318 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim28Q62318 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim28Q62318 AC154184.2-201ENSMUST00000225335 349 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim28Q62318 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim28Q62318 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim28Q62318 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim28Q62318 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim28Q62318 Gm43654-201ENSMUST00000200664 3417 ntBASIC6.12□□□□□ -1.43
Trim28Q62318 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim28Q62318 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim28Q62318 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim28Q62318 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim28Q62318 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trim28Q62318 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim28Q62318 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim28Q62318 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim28Q62318 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim28Q62318 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Trim28Q62318 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trim28Q62318 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim28Q62318 Defa-ps13-201ENSMUST00000120695 204 ntBASIC6.11□□□□□ -1.43
Trim28Q62318 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC6.11□□□□□ -1.43
Trim28Q62318 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC6.11□□□□□ -1.43
Trim28Q62318 Gm24768-201ENSMUST00000158512 94 ntBASIC6.11□□□□□ -1.43
Trim28Q62318 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trim28Q62318 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC6.11□□□□□ -1.43
Trim28Q62318 Gm24561-201ENSMUST00000175182 95 ntBASIC6.11□□□□□ -1.43
Trim28Q62318 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trim28Q62318 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC6.11□□□□□ -1.43
Trim28Q62318 Gm29600-201ENSMUST00000188687 377 ntBASIC6.11□□□□□ -1.43
Trim28Q62318 Gm21489-201ENSMUST00000189668 818 ntBASIC6.11□□□□□ -1.43
Trim28Q62318 Mir7116-201ENSMUST00000195956 70 ntBASIC6.11□□□□□ -1.43
Trim28Q62318 Gm43828-201ENSMUST00000196890 639 ntBASIC6.11□□□□□ -1.43
Trim28Q62318 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC6.11□□□□□ -1.43
Trim28Q62318 Gm42694-201ENSMUST00000196951 358 ntBASIC6.11□□□□□ -1.43
Trim28Q62318 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim28Q62318 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim28Q62318 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC6.11□□□□□ -1.43
Trim28Q62318 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim28Q62318 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trim28Q62318 AC154851.2-201ENSMUST00000222172 644 ntBASIC6.11□□□□□ -1.43
Trim28Q62318 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC6.11□□□□□ -1.43
Trim28Q62318 AC102603.1-201ENSMUST00000227481 584 ntBASIC6.11□□□□□ -1.43
Trim28Q62318 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Trim28Q62318 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trim28Q62318 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trim28Q62318 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim28Q62318 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Trim28Q62318 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trim28Q62318 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Trim28Q62318 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Trim28Q62318 Gm18493-201ENSMUST00000192084 1612 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim28Q62318 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim28Q62318 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Gm12667-201ENSMUST00000118299 1332 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
Trim28Q62318 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim28Q62318 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Trim28Q62318 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms