Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Snora64-201ENSMUST00000104521 134 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm22194-201ENSMUST00000116869 95 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm12885-201ENSMUST00000122246 328 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm14473-201ENSMUST00000122269 557 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm28385-201ENSMUST00000185671 292 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm42539-201ENSMUST00000197009 308 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm43655-201ENSMUST00000197367 222 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm43895-201ENSMUST00000203219 855 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm45006-201ENSMUST00000206078 690 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm5338-201ENSMUST00000209530 639 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm24919-201ENSMUST00000083020 106 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm38374-201ENSMUST00000194417 2033 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm28240-201ENSMUST00000187560 2053 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm24318-201ENSMUST00000104490 131 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm23499-201ENSMUST00000157736 268 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm22730-201ENSMUST00000158085 171 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm26036-201ENSMUST00000158149 144 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Mir6996-201ENSMUST00000183922 61 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm4644-201ENSMUST00000197587 400 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm8774-201ENSMUST00000203621 692 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm4045-201ENSMUST00000204076 310 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC5.16□□□□□ -1.58
Trim58Q5NCC9 AL672194.1-201ENSMUST00000224841 603 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 AC160756.1-201ENSMUST00000227266 235 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Trim58Q5NCC9 AC154329.1-201ENSMUST00000224408 3129 ntBASIC5.16□□□□□ -1.58
Trim58Q5NCC9 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.15□□□□□ -1.58
Trim58Q5NCC9 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Trim58Q5NCC9 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC5.15□□□□□ -1.58
Trim58Q5NCC9 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Trim58Q5NCC9 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.15□□□□□ -1.58
Trim58Q5NCC9 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Trim58Q5NCC9 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Trim58Q5NCC9 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm14628-201ENSMUST00000117508 635 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm11877-201ENSMUST00000118921 852 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm11719-201ENSMUST00000119399 351 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm12638-201ENSMUST00000119531 298 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm24380-201ENSMUST00000122696 324 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm17155-201ENSMUST00000165969 473 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm2950-201ENSMUST00000185530 520 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm37355-201ENSMUST00000193345 606 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm44604-201ENSMUST00000205475 496 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm44623-201ENSMUST00000207934 434 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm46998-201ENSMUST00000221444 330 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 AC211878.5-201ENSMUST00000221697 409 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Trim58Q5NCC9 AC140397.1-201ENSMUST00000225563 4562 ntBASIC5.14□□□□□ -1.59
Trim58Q5NCC9 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms