Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm8669-201ENSMUST00000183839 945 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm18409-202ENSMUST00000220105 529 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm36501-201ENSMUST00000221857 745 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm17915-201ENSMUST00000222077 548 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm8051-201ENSMUST00000120464 466 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm14623-201ENSMUST00000121398 603 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm15141-201ENSMUST00000121860 729 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm14122-201ENSMUST00000122076 973 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm16345-201ENSMUST00000146065 158 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm23250-201ENSMUST00000157444 267 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm17044-201ENSMUST00000168549 828 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm18560-201ENSMUST00000173463 1123 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Mir6343-201ENSMUST00000183584 84 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm28190-201ENSMUST00000189766 722 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm6546-201ENSMUST00000192096 766 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm37708-201ENSMUST00000192337 895 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm43345-201ENSMUST00000199484 269 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 AC174797.2-203ENSMUST00000224017 716 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm26203-201ENSMUST00000082911 114 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm24525-201ENSMUST00000082917 151 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm23510-201ENSMUST00000083083 163 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm23796-201ENSMUST00000084011 160 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.17□□□□□ -1.74
Trim40Q3UWA4 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm8145-201ENSMUST00000118220 745 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm23587-201ENSMUST00000157658 84 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm26001-201ENSMUST00000157989 103 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Mir1264-201ENSMUST00000175381 86 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm5558-201ENSMUST00000178933 495 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm27551-201ENSMUST00000184258 77 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm18036-201ENSMUST00000195256 272 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm36985-201ENSMUST00000195595 379 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm43967-201ENSMUST00000203787 301 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm44054-201ENSMUST00000203814 372 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms