Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm43888-201ENSMUST00000204405 2587 ntBASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Gm12900-201ENSMUST00000120919 573 ntBASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Gm44099-201ENSMUST00000203299 112 ntBASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Gm9370-201ENSMUST00000222787 609 ntBASIC3.88□□□□□ -1.79
Spg11Q3UHA3 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Gm43389-201ENSMUST00000196080 2595 ntBASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 AC159326.1-201ENSMUST00000219989 1302 ntBASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Spg11Q3UHA3 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Gm14534-201ENSMUST00000120045 357 ntBASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Gm23499-201ENSMUST00000157736 268 ntBASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Gm37833-201ENSMUST00000194342 3256 ntBASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Gm11372-201ENSMUST00000117348 570 ntBASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Gm9432-201ENSMUST00000117810 759 ntBASIC3.87□□□□□ -1.79
Spg11Q3UHA3 n-R5s48-201ENSMUST00000122482 110 ntBASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Gm26214-201ENSMUST00000158581 107 ntBASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Spg11Q3UHA3 AC124581.3-201ENSMUST00000224270 1624 ntBASIC3.87□□□□□ -1.79
Spg11Q3UHA3 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Gm12156-201ENSMUST00000119188 554 ntBASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Gm22099-201ENSMUST00000157925 123 ntBASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Gm46233-201ENSMUST00000217831 449 ntBASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Gm6645-201ENSMUST00000118505 2726 ntBASIC3.86□□□□□ -1.79
Spg11Q3UHA3 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Gm10933-201ENSMUST00000221891 1861 ntBASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Gm14849-201ENSMUST00000122293 2846 ntBASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Gm14101-201ENSMUST00000121502 473 ntBASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Gm2862-201ENSMUST00000161524 328 ntBASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC3.86□□□□□ -1.79
Spg11Q3UHA3 Gm17811-201ENSMUST00000206193 387 ntBASIC3.86□□□□□ -1.79
Spg11Q3UHA3 CT030195.1-201ENSMUST00000223887 378 ntBASIC3.86□□□□□ -1.79
Spg11Q3UHA3 AC167192.4-201ENSMUST00000224087 993 ntBASIC3.86□□□□□ -1.79
Spg11Q3UHA3 AC154576.1-201ENSMUST00000225864 563 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms