Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm24544-201ENSMUST00000103862 110 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Snord88a-201ENSMUST00000116723 90 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm14733-201ENSMUST00000117680 133 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm11448-201ENSMUST00000120427 450 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim63Q38HM4 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm23762-201ENSMUST00000158348 106 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm22769-201ENSMUST00000158367 98 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm23702-201ENSMUST00000158840 130 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm23343-201ENSMUST00000158964 143 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm25873-201ENSMUST00000180317 107 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm28066-201ENSMUST00000188657 472 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm8419-201ENSMUST00000189886 412 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm4785-201ENSMUST00000191025 751 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm37265-201ENSMUST00000191698 885 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm37167-201ENSMUST00000194946 396 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Mir6516-201ENSMUST00000196236 110 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm5983-201ENSMUST00000197739 770 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm7721-201ENSMUST00000200446 546 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm44214-201ENSMUST00000204153 606 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm44254-201ENSMUST00000204184 322 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm17822-201ENSMUST00000204307 351 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm44212-201ENSMUST00000205016 897 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm18467-201ENSMUST00000208805 434 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm29817-201ENSMUST00000210098 172 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm32899-201ENSMUST00000219694 207 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 AC117814.1-201ENSMUST00000226135 352 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Glycam1-204ENSMUST00000228895 641 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim63Q38HM4 n-R5s169-201ENSMUST00000083110 120 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm24411-201ENSMUST00000083428 131 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim63Q38HM4 Gm43665-201ENSMUST00000198672 1659 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm25757-201ENSMUST00000103986 123 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm11407-201ENSMUST00000120362 1058 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm15502-201ENSMUST00000121449 208 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm12175-201ENSMUST00000122081 345 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm22107-201ENSMUST00000122548 100 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm6182-201ENSMUST00000156439 1208 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm17177-201ENSMUST00000169144 483 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms