Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col9a1Q05722 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm24888-201ENSMUST00000104387 130 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm6181-201ENSMUST00000117187 264 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm8430-201ENSMUST00000119780 471 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.63□□□□□ -1.35
Col9a1Q05722 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col9a1Q05722 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm22308-201ENSMUST00000177609 107 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm38098-201ENSMUST00000194115 241 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm42866-201ENSMUST00000195919 3304 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC6.63□□□□□ -1.35
Col9a1Q05722 Mir3535-201ENSMUST00000197651 147 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm43529-201ENSMUST00000199178 412 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm42458-201ENSMUST00000201914 369 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.63□□□□□ -1.35
Col9a1Q05722 AC117240.2-201ENSMUST00000220921 263 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 AC130222.1-201ENSMUST00000221198 256 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Col9a1Q05722 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 CT009713.5-201ENSMUST00000224508 909 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 AC124549.1-201ENSMUST00000225912 333 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
Col9a1Q05722 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Col9a1Q05722 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.63□□□□□ -1.35
Col9a1Q05722 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Col9a1Q05722 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm22426-201ENSMUST00000103811 96 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm14825-201ENSMUST00000113538 701 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm14753-201ENSMUST00000118503 246 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm14115-201ENSMUST00000119242 482 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm12956-201ENSMUST00000122184 414 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm3810-201ENSMUST00000122413 476 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm2182-201ENSMUST00000145243 663 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm26037-201ENSMUST00000158150 311 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm25717-201ENSMUST00000158631 353 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm25235-201ENSMUST00000179933 107 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm28860-201ENSMUST00000188103 313 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm9775-201ENSMUST00000189402 331 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm32340-201ENSMUST00000192883 259 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm10292-202ENSMUST00000193165 585 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Igkv4-65-201ENSMUST00000196986 358 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm44943-201ENSMUST00000207254 300 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm45432-201ENSMUST00000210391 416 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm17849-201ENSMUST00000219788 853 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm2531-201ENSMUST00000075609 512 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm20302-201ENSMUST00000080671 275 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm22628-201ENSMUST00000082988 107 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Gm25515-201ENSMUST00000083858 157 ntBASIC6.62□□□□□ -1.35
Col9a1Q05722 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col9a1Q05722 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC6.62□□□□□ -1.35
Col9a1Q05722 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms