Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm22166-201ENSMUST00000178419 121 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm23288-201ENSMUST00000179213 121 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm27428-201ENSMUST00000184289 110 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.23□□□□□ -1.41
Col6a1Q04857 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm8458-201ENSMUST00000196658 819 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm18468-201ENSMUST00000207321 369 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm18470-201ENSMUST00000207467 420 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm18465-201ENSMUST00000207468 369 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm18464-201ENSMUST00000207803 420 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm18458-201ENSMUST00000207908 369 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm18461-201ENSMUST00000208421 420 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm18644-201ENSMUST00000211458 815 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm19219-201ENSMUST00000215863 724 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.23□□□□□ -1.41
Col6a1Q04857 AC101984.1-201ENSMUST00000219639 402 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm6171-201ENSMUST00000220760 645 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm46369-201ENSMUST00000221577 401 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 AC154257.2-201ENSMUST00000224166 340 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col6a1Q04857 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Col6a1Q04857 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a1Q04857 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.23□□□□□ -1.41
Col6a1Q04857 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a1Q04857 Gm42728-201ENSMUST00000202644 1552 ntBASIC6.23□□□□□ -1.41
Col6a1Q04857 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Col6a1Q04857 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.22□□□□□ -1.41
Col6a1Q04857 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm14986-201ENSMUST00000121262 1002 ntBASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm14678-201ENSMUST00000121396 482 ntBASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm24692-201ENSMUST00000157761 146 ntBASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm26310-201ENSMUST00000157766 117 ntBASIC6.22□□□□□ -1.41
Col6a1Q04857 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm44259-201ENSMUST00000204996 298 ntBASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.22□□□□□ -1.41
Col6a1Q04857 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC6.22□□□□□ -1.41
Col6a1Q04857 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.22□□□□□ -1.41
Col6a1Q04857 AC154600.1-201ENSMUST00000226480 714 ntBASIC6.22□□□□□ -1.41
Col6a1Q04857 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col6a1Q04857 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm22364-201ENSMUST00000083097 98 ntBASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm23345-201ENSMUST00000083817 150 ntBASIC6.22□□□□□ -1.41
Col6a1Q04857 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a1Q04857 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col6a1Q04857 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a1Q04857 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a1Q04857 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.22□□□□□ -1.41
Col6a1Q04857 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a1Q04857 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a1Q04857 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a1Q04857 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a1Q04857 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
Col6a1Q04857 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col6a1Q04857 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Col6a1Q04857 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col6a1Q04857 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm24160-201ENSMUST00000104594 126 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm26156-201ENSMUST00000116999 123 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm14918-201ENSMUST00000118153 268 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms