Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sox3P53784 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.25□□□□□ -1.73
Sox3P53784 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.25□□□□□ -1.73
Sox3P53784 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.25□□□□□ -1.73
Sox3P53784 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Sox3P53784 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Sox3P53784 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
Sox3P53784 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Sox3P53784 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Sox3P53784 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Sox3P53784 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.25□□□□□ -1.73
Sox3P53784 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
Sox3P53784 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sox3P53784 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sox3P53784 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.25□□□□□ -1.73
Sox3P53784 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sox3P53784 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Sox3P53784 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Sox3P53784 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.24□□□□□ -1.73
Sox3P53784 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Sox3P53784 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.24□□□□□ -1.73
Sox3P53784 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sox3P53784 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Sox3P53784 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.24□□□□□ -1.73
Sox3P53784 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sox3P53784 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Sox3P53784 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Sox3P53784 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.24□□□□□ -1.73
Sox3P53784 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Sox3P53784 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.24□□□□□ -1.73
Sox3P53784 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.24□□□□□ -1.73
Sox3P53784 Gm23496-201ENSMUST00000157741 248 ntBASIC4.24□□□□□ -1.73
Sox3P53784 Gm8498-201ENSMUST00000188227 974 ntBASIC4.24□□□□□ -1.73
Sox3P53784 Gm4045-201ENSMUST00000204076 310 ntBASIC4.24□□□□□ -1.73
Sox3P53784 Gm17811-201ENSMUST00000206193 387 ntBASIC4.24□□□□□ -1.73
Sox3P53784 Gm45498-201ENSMUST00000210346 283 ntBASIC4.24□□□□□ -1.73
Sox3P53784 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.24□□□□□ -1.73
Sox3P53784 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.24□□□□□ -1.73
Sox3P53784 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.24□□□□□ -1.73
Sox3P53784 Gm25005-201ENSMUST00000083812 156 ntBASIC4.24□□□□□ -1.73
Sox3P53784 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sox3P53784 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sox3P53784 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Sox3P53784 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Sox3P53784 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.24□□□□□ -1.73
Sox3P53784 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sox3P53784 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sox3P53784 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sox3P53784 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Gm18491-201ENSMUST00000192492 1594 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sox3P53784 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sox3P53784 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sox3P53784 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Sox3P53784 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sox3P53784 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.23□□□□□ -1.73
Sox3P53784 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.23□□□□□ -1.73
Sox3P53784 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sox3P53784 Gm13249-201ENSMUST00000177803 345 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Gm13144-201ENSMUST00000179385 345 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Gm26993-201ENSMUST00000182766 789 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Gm27773-201ENSMUST00000184087 78 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Gm28094-201ENSMUST00000185262 390 ntBASIC4.23□□□□□ -1.73
Sox3P53784 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sox3P53784 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sox3P53784 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Gm2522-201ENSMUST00000204280 322 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Gm18258-201ENSMUST00000210413 542 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sox3P53784 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sox3P53784 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sox3P53784 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sox3P53784 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sox3P53784 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.23□□□□□ -1.73
Sox3P53784 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.23□□□□□ -1.73
Sox3P53784 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.23□□□□□ -1.73
Sox3P53784 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Sox3P53784 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sox3P53784 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sox3P53784 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sox3P53784 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Sox3P53784 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.23□□□□□ -1.73
Sox3P53784 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.23□□□□□ -1.73
Sox3P53784 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
Sox3P53784 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sox3P53784 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sox3P53784 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC4.22□□□□□ -1.73
Sox3P53784 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.22□□□□□ -1.73
Sox3P53784 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sox3P53784 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Sox3P53784 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sox3P53784 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.22□□□□□ -1.73
Sox3P53784 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sox3P53784 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Sox3P53784 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sox3P53784 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms