Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm44583-201ENSMUST00000207478 281 ntBASIC4.65□□□□□ -1.66
Col2a1P28481 Gm45796-201ENSMUST00000212483 114 ntBASIC4.65□□□□□ -1.66
Col2a1P28481 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.65□□□□□ -1.66
Col2a1P28481 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col2a1P28481 Gm20775-201ENSMUST00000100115 1851 ntBASIC4.65□□□□□ -1.67
Col2a1P28481 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col2a1P28481 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col2a1P28481 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col2a1P28481 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col2a1P28481 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col2a1P28481 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
Col2a1P28481 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col2a1P28481 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col2a1P28481 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col2a1P28481 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col2a1P28481 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col2a1P28481 Gm4736-201ENSMUST00000100870 380 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col2a1P28481 Gm13321-201ENSMUST00000117101 400 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 Gm11761-201ENSMUST00000121392 445 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 Gm6027-201ENSMUST00000121467 756 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 Gm25572-201ENSMUST00000157527 172 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.64□□□□□ -1.67
Col2a1P28481 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col2a1P28481 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC4.64□□□□□ -1.67
Col2a1P28481 Gm34272-201ENSMUST00000208886 253 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.64□□□□□ -1.67
Col2a1P28481 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 AC154634.3-201ENSMUST00000224589 736 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col2a1P28481 Gm22868-201ENSMUST00000083955 164 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Col2a1P28481 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col2a1P28481 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 Gm42492-201ENSMUST00000195780 2915 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col2a1P28481 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col2a1P28481 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col2a1P28481 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col2a1P28481 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col2a1P28481 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.64□□□□□ -1.67
Col2a1P28481 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col2a1P28481 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col2a1P28481 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col2a1P28481 Gm11212-201ENSMUST00000118337 618 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Gm12900-201ENSMUST00000120919 573 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.63□□□□□ -1.67
Col2a1P28481 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC4.63□□□□□ -1.67
Col2a1P28481 Gm23959-201ENSMUST00000157208 324 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Gm24505-201ENSMUST00000157682 126 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.63□□□□□ -1.67
Col2a1P28481 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Gm29668-201ENSMUST00000187802 315 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col2a1P28481 Gm43315-201ENSMUST00000198120 313 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Gm8703-201ENSMUST00000203793 730 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.63□□□□□ -1.67
Col2a1P28481 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.63□□□□□ -1.67
Col2a1P28481 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col2a1P28481 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col2a1P28481 Mir132-201ENSMUST00000083603 66 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Col2a1P28481 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col2a1P28481 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col2a1P28481 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col2a1P28481 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col2a1P28481 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col2a1P28481 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.63□□□□□ -1.67
Col2a1P28481 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col2a1P28481 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col2a1P28481 Gm6754-201ENSMUST00000117124 913 ntBASIC4.62□□□□□ -1.67
Col2a1P28481 Gm12564-201ENSMUST00000119860 321 ntBASIC4.62□□□□□ -1.67
Col2a1P28481 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.62□□□□□ -1.67
Col2a1P28481 Gm16260-201ENSMUST00000155141 304 ntBASIC4.62□□□□□ -1.67
Col2a1P28481 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC4.62□□□□□ -1.67
Col2a1P28481 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col2a1P28481 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.62□□□□□ -1.67
Col2a1P28481 Gm29408-201ENSMUST00000187536 216 ntBASIC4.62□□□□□ -1.67
Col2a1P28481 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.62□□□□□ -1.67
Col2a1P28481 Gm28997-201ENSMUST00000188759 429 ntBASIC4.62□□□□□ -1.67
Col2a1P28481 Gm8745-201ENSMUST00000207846 782 ntBASIC4.62□□□□□ -1.67
Col2a1P28481 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC4.62□□□□□ -1.67
Col2a1P28481 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.62□□□□□ -1.67
Col2a1P28481 AV026068-237ENSMUST00000226075 572 ntBASIC4.62□□□□□ -1.67
Col2a1P28481 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Col2a1P28481 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Col2a1P28481 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Col2a1P28481 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.62□□□□□ -1.67
Col2a1P28481 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.62□□□□□ -1.67
Col2a1P28481 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms