Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Sdc1P18828 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sdc1P18828 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sdc1P18828 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sdc1P18828 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Sdc1P18828 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
Sdc1P18828 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sdc1P18828 Gm26996-201ENSMUST00000204418 1359 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Sdc1P18828 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
Sdc1P18828 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Sdc1P18828 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Sdc1P18828 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC3.55□□□□□ -1.84
Sdc1P18828 Gm6062-201ENSMUST00000120462 631 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm14925-201ENSMUST00000120611 438 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm11894-201ENSMUST00000121579 328 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm12087-201ENSMUST00000121878 258 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm13149-201ENSMUST00000122071 339 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Sdc1P18828 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.55□□□□□ -1.84
Sdc1P18828 Gm25246-201ENSMUST00000175476 69 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Sdc1P18828 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Sdc1P18828 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm27952-201ENSMUST00000184748 105 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm29588-201ENSMUST00000185738 298 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC3.55□□□□□ -1.84
Sdc1P18828 Gm37219-201ENSMUST00000192036 926 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm44360-201ENSMUST00000200081 82 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC3.55□□□□□ -1.84
Sdc1P18828 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.55□□□□□ -1.84
Sdc1P18828 Gm44776-201ENSMUST00000207212 381 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Sdc1P18828 AC122332.1-201ENSMUST00000214384 285 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm29884-201ENSMUST00000218403 453 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sdc1P18828 Gm7045-201ENSMUST00000221466 605 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sdc1P18828 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Sdc1P18828 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sdc1P18828 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sdc1P18828 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Sdc1P18828 AC120375.2-201ENSMUST00000226532 1853 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm42843-201ENSMUST00000196328 3616 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sdc1P18828 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sdc1P18828 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sdc1P18828 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sdc1P18828 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sdc1P18828 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Sdc1P18828 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Sdc1P18828 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm42436-201ENSMUST00000198804 3656 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.55□□□□□ -1.84
Sdc1P18828 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Sdc1P18828 AC140299.2-201ENSMUST00000219546 1969 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Sdc1P18828 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Sdc1P18828 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Sdc1P18828 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Sdc1P18828 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Sdc1P18828 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Sdc1P18828 Gm15403-201ENSMUST00000119343 1227 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm14712-201ENSMUST00000120195 772 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm14601-201ENSMUST00000120892 236 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm22345-201ENSMUST00000122644 107 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Sdc1P18828 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Sdc1P18828 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Sdc1P18828 Gm23673-201ENSMUST00000157474 298 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm26187-201ENSMUST00000157693 101 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm26086-201ENSMUST00000157902 263 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Sdc1P18828 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Sdc1P18828 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Sdc1P18828 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Sdc1P18828 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm27460-201ENSMUST00000184213 100 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm27286-201ENSMUST00000184934 179 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Sdc1P18828 Gm29534-201ENSMUST00000187328 382 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm5252-201ENSMUST00000189030 909 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.54□□□□□ -1.84
Sdc1P18828 Gm6546-201ENSMUST00000192096 766 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm43494-201ENSMUST00000197672 388 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Sdc1P18828 Gm18007-201ENSMUST00000205019 844 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm44765-201ENSMUST00000206927 601 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm18468-201ENSMUST00000207321 369 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm18470-201ENSMUST00000207467 420 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms