Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm24541-201ENSMUST00000103871 96 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm24855-201ENSMUST00000104848 97 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm11486-201ENSMUST00000107322 478 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Cdx1P18111 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Cdx1P18111 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm14750-201ENSMUST00000118262 516 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm15951-201ENSMUST00000118377 400 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm12988-201ENSMUST00000119054 478 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm11366-201ENSMUST00000119279 429 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm12422-201ENSMUST00000121431 302 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm23534-201ENSMUST00000157539 97 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm26028-201ENSMUST00000158660 294 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm23700-201ENSMUST00000158842 102 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm27718-201ENSMUST00000183721 86 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm28877-201ENSMUST00000191349 604 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm9134-201ENSMUST00000193186 551 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm7182-201ENSMUST00000193351 732 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm44349-201ENSMUST00000197048 123 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm7721-201ENSMUST00000200446 546 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC3.76□□□□□ -1.81
Cdx1P18111 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 AC110816.1-201ENSMUST00000218559 980 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 AC127279.1-201ENSMUST00000220140 637 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 CT030254.3-201ENSMUST00000225959 1231 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Cdx1P18111 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Cdx1P18111 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC3.76□□□□□ -1.81
Cdx1P18111 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Cdx1P18111 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Cdx1P18111 Gm26330-201ENSMUST00000082817 104 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Mir28a-201ENSMUST00000083560 86 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Cdx1P18111 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
Cdx1P18111 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Cdx1P18111 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.76□□□□□ -1.81
Cdx1P18111 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC3.76□□□□□ -1.81
Cdx1P18111 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Cdx1P18111 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Cdx1P18111 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Cdx1P18111 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Cdx1P18111 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Cdx1P18111 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC3.75□□□□□ -1.81
Cdx1P18111 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Cdx1P18111 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
Cdx1P18111 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Cdx1P18111 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Cdx1P18111 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Cdx1P18111 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Cdx1P18111 Gm11409-201ENSMUST00000118621 403 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Gm8757-201ENSMUST00000119660 372 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Gm13149-201ENSMUST00000122071 339 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Cdx1P18111 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC3.75□□□□□ -1.81
Cdx1P18111 Gm22870-201ENSMUST00000157501 112 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Gm9613-201ENSMUST00000171662 196 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Cdx1P18111 Gm7094-201ENSMUST00000178379 366 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Cdx1P18111 V1rg10-201ENSMUST00000183378 937 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Mir6943-201ENSMUST00000185186 66 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Gm28503-201ENSMUST00000185966 147 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Gm9238-201ENSMUST00000196181 329 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Gm32536-201ENSMUST00000205209 445 ntBASIC3.75□□□□□ -1.81
Cdx1P18111 Gm44681-201ENSMUST00000208447 842 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms