Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm45061-201ENSMUST00000204395 2095 ntBASIC4.8□□□□□ -1.64
Col1a1P11087 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col1a1P11087 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col1a1P11087 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col1a1P11087 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col1a1P11087 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col1a1P11087 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.79□□□□□ -1.64
Col1a1P11087 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col1a1P11087 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col1a1P11087 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col1a1P11087 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col1a1P11087 Gm24376-201ENSMUST00000104399 127 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Col1a1P11087 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col1a1P11087 Gm12760-201ENSMUST00000117861 482 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 Gm12900-201ENSMUST00000120919 573 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 Gm11385-201ENSMUST00000121513 570 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 Gm11200-201ENSMUST00000121698 448 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 Gm11403-201ENSMUST00000122195 369 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 Gm25667-201ENSMUST00000157701 275 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
Col1a1P11087 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.79□□□□□ -1.64
Col1a1P11087 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col1a1P11087 Gm43084-201ENSMUST00000200696 947 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.79□□□□□ -1.64
Col1a1P11087 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col1a1P11087 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 Gm10916-201ENSMUST00000080330 483 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col1a1P11087 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.79□□□□□ -1.64
Col1a1P11087 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Col1a1P11087 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col1a1P11087 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Col1a1P11087 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col1a1P11087 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col1a1P11087 Gm11372-201ENSMUST00000117348 570 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col1a1P11087 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Gm13118-201ENSMUST00000120402 549 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Gm11982-201ENSMUST00000121480 314 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Gm2862-201ENSMUST00000161524 328 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col1a1P11087 Gm27189-201ENSMUST00000184119 190 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Gm28997-201ENSMUST00000188759 429 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Gm7041-201ENSMUST00000201227 524 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Gm19908-201ENSMUST00000204684 391 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.78□□□□□ -1.64
Col1a1P11087 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.78□□□□□ -1.64
Col1a1P11087 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Gm23925-201ENSMUST00000082471 132 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Col1a1P11087 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col1a1P11087 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC4.78□□□□□ -1.64
Col1a1P11087 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
Col1a1P11087 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Col1a1P11087 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.65
Col1a1P11087 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col1a1P11087 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col1a1P11087 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col1a1P11087 Gm10241-201ENSMUST00000117664 286 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Gm13690-201ENSMUST00000118989 285 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Gm15141-201ENSMUST00000121860 729 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Gm25105-201ENSMUST00000122477 130 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Gm22480-201ENSMUST00000122568 128 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Gm18403-201ENSMUST00000192907 529 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Gm37104-201ENSMUST00000193278 196 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.77□□□□□ -1.65
Col1a1P11087 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC4.77□□□□□ -1.65
Col1a1P11087 Svet1-201ENSMUST00000209370 3940 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col1a1P11087 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col1a1P11087 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col1a1P11087 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col1a1P11087 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col1a1P11087 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.77□□□□□ -1.65
Col1a1P11087 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col1a1P11087 Gm25272-201ENSMUST00000104293 128 ntBASIC4.76□□□□□ -1.65
Col1a1P11087 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col1a1P11087 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.76□□□□□ -1.65
Col1a1P11087 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC4.76□□□□□ -1.65
Col1a1P11087 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col1a1P11087 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col1a1P11087 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col1a1P11087 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms