Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.48□□□□□ -1.69
TnfP06804 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.48□□□□□ -1.69
TnfP06804 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.48□□□□□ -1.69
TnfP06804 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.48□□□□□ -1.69
TnfP06804 Gm5548-201ENSMUST00000055878 397 ntBASIC4.48□□□□□ -1.69
TnfP06804 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TnfP06804 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TnfP06804 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TnfP06804 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
TnfP06804 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TnfP06804 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TnfP06804 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
TnfP06804 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.47□□□□□ -1.69
TnfP06804 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TnfP06804 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TnfP06804 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TnfP06804 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.47□□□□□ -1.69
TnfP06804 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TnfP06804 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.47□□□□□ -1.69
TnfP06804 Gm13321-201ENSMUST00000117101 400 ntBASIC4.47□□□□□ -1.69
TnfP06804 Gm14788-201ENSMUST00000119457 375 ntBASIC4.47□□□□□ -1.69
TnfP06804 Clec2f-201ENSMUST00000121051 374 ntBASIC4.47□□□□□ -1.69
TnfP06804 Gm22204-201ENSMUST00000122654 327 ntBASIC4.47□□□□□ -1.69
TnfP06804 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TnfP06804 Gm23499-201ENSMUST00000157736 268 ntBASIC4.47□□□□□ -1.69
TnfP06804 Gm22857-201ENSMUST00000174969 134 ntBASIC4.47□□□□□ -1.69
TnfP06804 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TnfP06804 Gm27636-201ENSMUST00000184528 122 ntBASIC4.47□□□□□ -1.69
TnfP06804 Gm27190-201ENSMUST00000184890 542 ntBASIC4.47□□□□□ -1.69
TnfP06804 Gm4854-201ENSMUST00000185902 574 ntBASIC4.47□□□□□ -1.69
TnfP06804 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.47□□□□□ -1.69
TnfP06804 Gm38166-201ENSMUST00000191660 471 ntBASIC4.47□□□□□ -1.69
TnfP06804 Gm43441-201ENSMUST00000201458 205 ntBASIC4.47□□□□□ -1.69
TnfP06804 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TnfP06804 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
TnfP06804 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.47□□□□□ -1.69
TnfP06804 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.47□□□□□ -1.69
TnfP06804 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TnfP06804 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.47□□□□□ -1.69
TnfP06804 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.47□□□□□ -1.69
TnfP06804 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TnfP06804 Gm26165-201ENSMUST00000083791 138 ntBASIC4.47□□□□□ -1.69
TnfP06804 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TnfP06804 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TnfP06804 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TnfP06804 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TnfP06804 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.46□□□□□ -1.69
TnfP06804 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
TnfP06804 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TnfP06804 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
TnfP06804 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TnfP06804 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
TnfP06804 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.46□□□□□ -1.69
TnfP06804 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TnfP06804 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TnfP06804 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TnfP06804 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.46□□□□□ -1.7
TnfP06804 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TnfP06804 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TnfP06804 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TnfP06804 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TnfP06804 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.46□□□□□ -1.7
TnfP06804 Gm12760-201ENSMUST00000117861 482 ntBASIC4.46□□□□□ -1.7
TnfP06804 Gm13532-201ENSMUST00000120373 240 ntBASIC4.46□□□□□ -1.7
TnfP06804 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.46□□□□□ -1.7
TnfP06804 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.46□□□□□ -1.7
TnfP06804 Gm23121-201ENSMUST00000157653 173 ntBASIC4.46□□□□□ -1.7
TnfP06804 Gm22135-201ENSMUST00000158752 108 ntBASIC4.46□□□□□ -1.7
TnfP06804 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TnfP06804 Trbv10-201ENSMUST00000168322 289 ntBASIC4.46□□□□□ -1.7
TnfP06804 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TnfP06804 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.46□□□□□ -1.7
TnfP06804 Mir6996-201ENSMUST00000183922 61 ntBASIC4.46□□□□□ -1.7
TnfP06804 Gm43853-201ENSMUST00000197162 301 ntBASIC4.46□□□□□ -1.7
TnfP06804 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.46□□□□□ -1.7
TnfP06804 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
TnfP06804 CT030030.1-201ENSMUST00000218809 152 ntBASIC4.46□□□□□ -1.7
TnfP06804 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.46□□□□□ -1.7
TnfP06804 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.46□□□□□ -1.7
TnfP06804 Gm46998-201ENSMUST00000221444 330 ntBASIC4.46□□□□□ -1.7
TnfP06804 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TnfP06804 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TnfP06804 Gm10916-201ENSMUST00000080330 483 ntBASIC4.46□□□□□ -1.7
TnfP06804 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.46□□□□□ -1.7
TnfP06804 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TnfP06804 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TnfP06804 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TnfP06804 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TnfP06804 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TnfP06804 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
TnfP06804 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
TnfP06804 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TnfP06804 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.45□□□□□ -1.7
TnfP06804 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TnfP06804 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
TnfP06804 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.45□□□□□ -1.7
TnfP06804 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TnfP06804 Gm11432-201ENSMUST00000117334 231 ntBASIC4.45□□□□□ -1.7
TnfP06804 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.45□□□□□ -1.7
TnfP06804 Gm25999-201ENSMUST00000175398 133 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms