Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm19936-201ENSMUST00000216414 838 ntBASIC4.67□□□□□ -1.66
Cbx4O55187 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.67□□□□□ -1.66
Cbx4O55187 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.67□□□□□ -1.66
Cbx4O55187 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.67□□□□□ -1.66
Cbx4O55187 AC183092.2-201ENSMUST00000225542 1153 ntBASIC4.67□□□□□ -1.66
Cbx4O55187 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.67□□□□□ -1.66
Cbx4O55187 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cbx4O55187 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Cbx4O55187 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Cbx4O55187 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.67□□□□□ -1.66
Cbx4O55187 Gm8724-201ENSMUST00000081668 483 ntBASIC4.67□□□□□ -1.66
Cbx4O55187 Gm25131-201ENSMUST00000082653 151 ntBASIC4.67□□□□□ -1.66
Cbx4O55187 Mir17-201ENSMUST00000083574 84 ntBASIC4.67□□□□□ -1.66
Cbx4O55187 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Cbx4O55187 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cbx4O55187 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cbx4O55187 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cbx4O55187 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cbx4O55187 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.67□□□□□ -1.66
Cbx4O55187 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.67□□□□□ -1.66
Cbx4O55187 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cbx4O55187 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.67□□□□□ -1.66
Cbx4O55187 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Cbx4O55187 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cbx4O55187 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
Cbx4O55187 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.66□□□□□ -1.66
Cbx4O55187 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Cbx4O55187 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Cbx4O55187 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Cbx4O55187 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Cbx4O55187 Gm15110-201ENSMUST00000117545 881 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Gm11346-201ENSMUST00000118346 704 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Gm15367-201ENSMUST00000122398 1016 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Gm23111-201ENSMUST00000122652 105 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cbx4O55187 Gm22870-201ENSMUST00000157501 112 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Gm26352-201ENSMUST00000158223 125 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Gm9890-201ENSMUST00000171867 537 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Gm22646-201ENSMUST00000175130 115 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Gm27025-201ENSMUST00000182392 942 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Gm2950-201ENSMUST00000185530 520 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Gm2617-201ENSMUST00000185690 1066 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cbx4O55187 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Gm44282-201ENSMUST00000203199 190 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Gm44402-201ENSMUST00000203677 238 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Gm8319-201ENSMUST00000205708 641 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.66□□□□□ -1.66
Cbx4O55187 AC140210.1-201ENSMUST00000224961 534 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Cbx4O55187 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Cbx4O55187 Gm6177-201ENSMUST00000085589 465 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Cbx4O55187 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Cbx4O55187 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cbx4O55187 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.66□□□□□ -1.66
Cbx4O55187 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cbx4O55187 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC4.66□□□□□ -1.66
Cbx4O55187 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Cbx4O55187 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Cbx4O55187 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cbx4O55187 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Cbx4O55187 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Cbx4O55187 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Cbx4O55187 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Cbx4O55187 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
Cbx4O55187 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Cbx4O55187 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cbx4O55187 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
Cbx4O55187 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cbx4O55187 Gm24578-201ENSMUST00000103970 129 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Gm22019-201ENSMUST00000104359 96 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Gm24160-201ENSMUST00000104594 126 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Gm25509-201ENSMUST00000116985 106 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Gm15670-201ENSMUST00000117740 447 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Gm14706-201ENSMUST00000117744 255 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cbx4O55187 Gm8129-201ENSMUST00000118230 213 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Gm11877-201ENSMUST00000118921 852 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cbx4O55187 Gm13508-201ENSMUST00000121639 775 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.65□□□□□ -1.67
Cbx4O55187 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC4.65□□□□□ -1.67
Cbx4O55187 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.65□□□□□ -1.67
Cbx4O55187 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Gm23046-201ENSMUST00000158369 284 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cbx4O55187 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.65□□□□□ -1.67
Cbx4O55187 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cbx4O55187 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cbx4O55187 Gm8214-201ENSMUST00000172123 351 ntBASIC4.65□□□□□ -1.67
Cbx4O55187 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cbx4O55187 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Cbx4O55187 Gm29086-201ENSMUST00000186774 222 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms