Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NpcdF8VQB8 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
NpcdF8VQB8 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NpcdF8VQB8 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
NpcdF8VQB8 Gm17060-201ENSMUST00000172394 824 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
NpcdF8VQB8 Gm27875-201ENSMUST00000184425 123 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 Gm28779-201ENSMUST00000189678 323 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 Gm37399-201ENSMUST00000195224 416 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.67□□□□□ -1.34
NpcdF8VQB8 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 Gm7990-201ENSMUST00000212126 593 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 Gm18487-201ENSMUST00000215826 878 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 Gm18541-201ENSMUST00000215935 538 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 AC192334.2-201ENSMUST00000223087 1091 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 CT030705.1-201ENSMUST00000223971 533 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 Gm23423-201ENSMUST00000082782 106 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NpcdF8VQB8 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NpcdF8VQB8 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NpcdF8VQB8 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
NpcdF8VQB8 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
NpcdF8VQB8 Naip3-201ENSMUST00000118082 4208 ntBASIC6.67□□□□□ -1.34
NpcdF8VQB8 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NpcdF8VQB8 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm11890-201ENSMUST00000119585 417 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm5405-201ENSMUST00000120478 609 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm6031-201ENSMUST00000121314 1054 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm13149-201ENSMUST00000122071 339 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Mir6951-201ENSMUST00000183910 75 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm19206-201ENSMUST00000186401 827 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm5372-201ENSMUST00000187540 409 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm43315-201ENSMUST00000198120 313 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm43505-201ENSMUST00000200579 139 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm43919-201ENSMUST00000204303 364 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm5001-201ENSMUST00000204361 331 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm44277-201ENSMUST00000205128 649 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NpcdF8VQB8 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.66□□□□□ -1.34
NpcdF8VQB8 AC159256.1-201ENSMUST00000224298 1039 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.66□□□□□ -1.34
NpcdF8VQB8 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NpcdF8VQB8 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NpcdF8VQB8 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
NpcdF8VQB8 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm45149-201ENSMUST00000206459 2172 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NpcdF8VQB8 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
NpcdF8VQB8 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
NpcdF8VQB8 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm24429-201ENSMUST00000104076 132 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm11561-201ENSMUST00000117429 417 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm15382-201ENSMUST00000118011 537 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm4845-201ENSMUST00000179202 562 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm27754-201ENSMUST00000183340 126 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm27193-201ENSMUST00000184217 586 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm9687-201ENSMUST00000189312 602 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm18291-201ENSMUST00000190791 301 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm5034-201ENSMUST00000199115 634 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm42643-201ENSMUST00000200504 279 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.65□□□□□ -1.34
NpcdF8VQB8 AC134334.1-201ENSMUST00000214277 255 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm18997-201ENSMUST00000216353 822 ntBASIC6.65□□□□□ -1.34
NpcdF8VQB8 Gm8942-201ENSMUST00000217892 400 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms