Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Trib2-201ENSMUST00000020922 4198 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm37204-201ENSMUST00000192389 3961 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gramd4-201ENSMUST00000088931 4115 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm43323-201ENSMUST00000202328 4258 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 AC126033.1-201ENSMUST00000227628 6773 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Tuba4a-202ENSMUST00000186213 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Dgkh-206ENSMUST00000228362 3308 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm25607-201ENSMUST00000104020 127 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm24794-201ENSMUST00000104288 140 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm22546-201ENSMUST00000104351 130 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm22149-201ENSMUST00000104442 136 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Snora64-201ENSMUST00000104521 134 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm23840-201ENSMUST00000116950 97 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm11460-201ENSMUST00000118200 361 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm12980-201ENSMUST00000118912 336 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm11517-201ENSMUST00000119491 387 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm15129-201ENSMUST00000119673 279 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm14328-201ENSMUST00000122178 408 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm13828-201ENSMUST00000122278 363 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 n-R5s175-201ENSMUST00000122599 117 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm15742-201ENSMUST00000123905 659 ntTSL 3 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Fam229b-204ENSMUST00000134279 700 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm2182-201ENSMUST00000145243 663 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm25826-201ENSMUST00000157090 137 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm23171-201ENSMUST00000157159 264 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm25391-201ENSMUST00000157342 134 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm23713-201ENSMUST00000157353 70 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm24063-201ENSMUST00000157491 105 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm23589-201ENSMUST00000157660 105 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm23043-201ENSMUST00000157890 109 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm22615-201ENSMUST00000158102 70 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 156.7 ms