Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Scn1aA2APX8 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.22□□□□□ -1.73
Scn1aA2APX8 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Scn1aA2APX8 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Scn1aA2APX8 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Scn1aA2APX8 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.21□□□□□ -1.73
Scn1aA2APX8 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Scn1aA2APX8 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Scn1aA2APX8 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm4736-201ENSMUST00000100870 380 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm6754-201ENSMUST00000117124 913 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm14299-201ENSMUST00000117586 397 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm14037-201ENSMUST00000120576 313 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm8874-201ENSMUST00000196826 286 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm42451-201ENSMUST00000197410 244 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm45553-201ENSMUST00000209929 507 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Mir370-201ENSMUST00000083499 79 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Scn1aA2APX8 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Scn1aA2APX8 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm37056-201ENSMUST00000192141 1865 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Scn1aA2APX8 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm25765-201ENSMUST00000104100 132 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm24067-201ENSMUST00000104514 85 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm15022-201ENSMUST00000122074 746 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm11281-201ENSMUST00000141391 576 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm23617-201ENSMUST00000175410 95 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Mir5710-201ENSMUST00000176884 69 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm28924-201ENSMUST00000190012 241 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Scn1aA2APX8 AC125539.1-202ENSMUST00000226449 670 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Scn1aA2APX8 Gm25200-201ENSMUST00000083094 130 ntBASIC4.21□□□□□ -1.74
Scn1aA2APX8 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Scn1aA2APX8 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Scn1aA2APX8 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC4.2□□□□□ -1.74
Scn1aA2APX8 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.2□□□□□ -1.74
Scn1aA2APX8 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.2□□□□□ -1.74
Scn1aA2APX8 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.2□□□□□ -1.74
Scn1aA2APX8 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.2□□□□□ -1.74
Scn1aA2APX8 Gm25169-201ENSMUST00000104190 129 ntBASIC4.2□□□□□ -1.74
Scn1aA2APX8 Gm12564-201ENSMUST00000119860 321 ntBASIC4.2□□□□□ -1.74
Scn1aA2APX8 Gm29588-201ENSMUST00000185738 298 ntBASIC4.2□□□□□ -1.74
Scn1aA2APX8 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Gm8745-201ENSMUST00000207846 782 ntBASIC4.2□□□□□ -1.74
Scn1aA2APX8 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.2□□□□□ -1.74
Scn1aA2APX8 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.2□□□□□ -1.74
Scn1aA2APX8 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.2□□□□□ -1.74
Scn1aA2APX8 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.2□□□□□ -1.74
Scn1aA2APX8 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.2□□□□□ -1.74
Scn1aA2APX8 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Scn1aA2APX8 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Gm11372-201ENSMUST00000117348 570 ntBASIC4.19□□□□□ -1.74
Scn1aA2APX8 Gm15994-201ENSMUST00000118029 402 ntBASIC4.19□□□□□ -1.74
Scn1aA2APX8 Gm22588-201ENSMUST00000157510 140 ntBASIC4.19□□□□□ -1.74
Scn1aA2APX8 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Scn1aA2APX8 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.19□□□□□ -1.74
Scn1aA2APX8 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.19□□□□□ -1.74
Scn1aA2APX8 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Scn1aA2APX8 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Scn1aA2APX8 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC4.19□□□□□ -1.74
Scn1aA2APX8 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.19□□□□□ -1.74
Scn1aA2APX8 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Gm15783-201ENSMUST00000117521 633 ntBASIC4.19□□□□□ -1.74
Scn1aA2APX8 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Scn1aA2APX8 Gm24961-201ENSMUST00000157918 184 ntBASIC4.19□□□□□ -1.74
Scn1aA2APX8 Gm24898-201ENSMUST00000158133 106 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms