Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm3816-201ENSMUST00000209803 433 ntBASIC3.17□□□□□ -1.9
Smco4Q9JIS3 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Gm30674-201ENSMUST00000214523 392 ntBASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Gm3338-201ENSMUST00000220982 269 ntBASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Gm4057-201ENSMUST00000221407 368 ntBASIC3.17□□□□□ -1.9
Smco4Q9JIS3 AC125539.2-201ENSMUST00000228339 753 ntBASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Gm23464-201ENSMUST00000083145 147 ntBASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Gm18422-202ENSMUST00000203798 2214 ntBASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Smco4Q9JIS3 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm25758-201ENSMUST00000103987 129 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm8200-201ENSMUST00000122390 222 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm22312-201ENSMUST00000158005 130 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm3091-201ENSMUST00000163408 484 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm22243-201ENSMUST00000178754 120 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm20574-201ENSMUST00000182867 917 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm37575-201ENSMUST00000195467 309 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm44946-201ENSMUST00000208425 572 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm45610-201ENSMUST00000209227 784 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm46190-201ENSMUST00000219650 427 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Gm46998-201ENSMUST00000221444 330 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 AC154724.1-201ENSMUST00000225782 821 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Mir218-2-201ENSMUST00000083649 110 ntBASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Smco4Q9JIS3 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Smco4Q9JIS3 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.15□□□□□ -1.9
Smco4Q9JIS3 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Smco4Q9JIS3 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Smco4Q9JIS3 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Smco4Q9JIS3 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Smco4Q9JIS3 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm22374-201ENSMUST00000104583 132 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm11633-201ENSMUST00000118176 444 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm15078-201ENSMUST00000118371 782 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm13501-201ENSMUST00000118477 979 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm14836-201ENSMUST00000118567 471 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm13831-201ENSMUST00000118764 302 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm23789-201ENSMUST00000122536 301 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm5353-201ENSMUST00000139800 793 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm22084-201ENSMUST00000157585 105 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm8599-201ENSMUST00000193033 457 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm17956-201ENSMUST00000199931 838 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm44048-201ENSMUST00000204531 361 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 Gm31931-201ENSMUST00000219666 222 ntBASIC3.15□□□□□ -1.91
Smco4Q9JIS3 AC154484.2-201ENSMUST00000228359 818 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms