Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Chmp4bQ9D8B3 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Chmp4bQ9D8B3 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC5.37□□□□□ -1.55
Chmp4bQ9D8B3 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC5.37□□□□□ -1.55
Chmp4bQ9D8B3 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.37□□□□□ -1.55
Chmp4bQ9D8B3 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Chmp4bQ9D8B3 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Chmp4bQ9D8B3 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Chmp4bQ9D8B3 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm12328-201ENSMUST00000118611 197 ntBASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm14067-201ENSMUST00000119340 314 ntBASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm12103-201ENSMUST00000121892 362 ntBASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm26187-201ENSMUST00000157693 101 ntBASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm22857-201ENSMUST00000174969 134 ntBASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm44023-201ENSMUST00000203710 469 ntBASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm19134-201ENSMUST00000221203 487 ntBASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Chmp4bQ9D8B3 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Gm37747-201ENSMUST00000193717 4003 ntBASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Gm5060-201ENSMUST00000120072 599 ntBASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Gm15212-201ENSMUST00000122403 466 ntBASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Gm3084-201ENSMUST00000169967 598 ntBASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Gm6802-202ENSMUST00000186566 126 ntBASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Gm29281-201ENSMUST00000188077 381 ntBASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Gm28500-201ENSMUST00000190286 151 ntBASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Gm42824-201ENSMUST00000199361 247 ntBASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Gm43895-201ENSMUST00000203219 855 ntBASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Chmp4bQ9D8B3 AC124346.2-201ENSMUST00000217986 5083 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Mir147-201ENSMUST00000102354 79 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Gm24788-201ENSMUST00000104283 156 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Gm11673-201ENSMUST00000117846 331 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Gm15361-201ENSMUST00000119320 444 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Gm14908-201ENSMUST00000120930 1286 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Clec2f-201ENSMUST00000121051 374 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Gm12466-201ENSMUST00000121199 620 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Gm27636-201ENSMUST00000184528 122 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Gm44845-201ENSMUST00000208773 335 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Gm39197-201ENSMUST00000212069 457 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 AC110816.1-201ENSMUST00000218559 980 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Mir134-201ENSMUST00000083492 71 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Gm7957-201ENSMUST00000207404 2602 ntBASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Chmp4bQ9D8B3 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Chmp4bQ9D8B3 Gm15933-201ENSMUST00000117215 616 ntBASIC5.33□□□□□ -1.56
Chmp4bQ9D8B3 Gm14365-201ENSMUST00000117535 587 ntBASIC5.33□□□□□ -1.56
Chmp4bQ9D8B3 Gm14107-201ENSMUST00000117774 330 ntBASIC5.33□□□□□ -1.56
Chmp4bQ9D8B3 Gm14750-201ENSMUST00000118262 516 ntBASIC5.33□□□□□ -1.56
Chmp4bQ9D8B3 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Chmp4bQ9D8B3 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.33□□□□□ -1.56
Chmp4bQ9D8B3 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.33□□□□□ -1.56
Chmp4bQ9D8B3 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.33□□□□□ -1.56
Chmp4bQ9D8B3 Gm23743-201ENSMUST00000157389 274 ntBASIC5.33□□□□□ -1.56
Chmp4bQ9D8B3 Gm24685-201ENSMUST00000157764 285 ntBASIC5.33□□□□□ -1.56
Chmp4bQ9D8B3 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms