Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm28016-201ENSMUST00000184594 196 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm38050-201ENSMUST00000191904 238 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm38097-201ENSMUST00000192936 439 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm6631-201ENSMUST00000193699 559 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm8479-201ENSMUST00000203825 718 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm18226-201ENSMUST00000215261 521 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 AC131710.2-201ENSMUST00000226773 683 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm26064-201ENSMUST00000083381 109 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Gm13340-201ENSMUST00000117219 1545 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.57□□□□□ -1.52
Ssu72Q9CY97 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm15988-201ENSMUST00000118677 367 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm14863-201ENSMUST00000119648 307 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm14867-201ENSMUST00000120156 866 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm15014-201ENSMUST00000120742 258 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm8317-201ENSMUST00000121261 471 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm20690-201ENSMUST00000177341 315 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm26950-201ENSMUST00000182734 498 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm29105-201ENSMUST00000187256 450 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm29148-201ENSMUST00000188140 336 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm42961-201ENSMUST00000202023 181 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm43976-201ENSMUST00000203637 235 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm44687-201ENSMUST00000204975 235 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm19140-201ENSMUST00000209790 421 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm3442-201ENSMUST00000216808 710 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm23623-201ENSMUST00000082461 107 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ssu72Q9CY97 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Ssu72Q9CY97 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ssu72Q9CY97 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.55□□□□□ -1.52
Ssu72Q9CY97 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Ssu72Q9CY97 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Ssu72Q9CY97 Gm23839-201ENSMUST00000116957 109 ntBASIC5.55□□□□□ -1.52
Ssu72Q9CY97 Gm11386-201ENSMUST00000117761 347 ntBASIC5.55□□□□□ -1.52
Ssu72Q9CY97 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.55□□□□□ -1.52
Ssu72Q9CY97 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Ssu72Q9CY97 Gm15381-201ENSMUST00000121501 1156 ntBASIC5.55□□□□□ -1.52
Ssu72Q9CY97 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC5.55□□□□□ -1.52
Ssu72Q9CY97 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.55□□□□□ -1.52
Ssu72Q9CY97 Gm25334-201ENSMUST00000158036 110 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms