Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm23739-201ENSMUST00000102295 108 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm24079-201ENSMUST00000104352 132 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm8430-201ENSMUST00000119780 471 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Magea9-ps-201ENSMUST00000140655 732 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm25048-201ENSMUST00000158598 91 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Magea9-ps-202ENSMUST00000167328 899 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm20673-201ENSMUST00000177167 430 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm21070-201ENSMUST00000182425 985 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm29148-201ENSMUST00000188140 336 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm5734-201ENSMUST00000189787 913 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm37418-201ENSMUST00000195031 274 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm8458-201ENSMUST00000196658 819 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm19140-201ENSMUST00000209790 421 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm5612-201ENSMUST00000053326 375 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Mir421-201ENSMUST00000083575 76 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm24763-201ENSMUST00000083688 190 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm23795-201ENSMUST00000084006 137 ntBASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.48□□□□□ -1.37
Trim11Q99PQ2 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm14529-201ENSMUST00000117894 406 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm6923-201ENSMUST00000118343 406 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm25117-201ENSMUST00000157194 144 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm22216-201ENSMUST00000157557 114 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm24901-201ENSMUST00000158125 110 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm24729-201ENSMUST00000158225 137 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm3091-201ENSMUST00000163408 484 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm22911-201ENSMUST00000177920 107 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm8041-201ENSMUST00000199755 616 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm18423-201ENSMUST00000205144 1074 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trim11Q99PQ2 Gm36962-201ENSMUST00000192114 1761 ntBASIC6.46□□□□□ -1.37
Trim11Q99PQ2 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
Trim11Q99PQ2 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.46□□□□□ -1.37
Trim11Q99PQ2 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Trim11Q99PQ2 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Trim11Q99PQ2 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim11Q99PQ2 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim11Q99PQ2 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim11Q99PQ2 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Trim11Q99PQ2 Gm11408-201ENSMUST00000117889 519 ntBASIC6.46□□□□□ -1.38
Trim11Q99PQ2 Gm15025-201ENSMUST00000118434 418 ntBASIC6.46□□□□□ -1.38
Trim11Q99PQ2 Gm13866-201ENSMUST00000118901 968 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms