Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 Gm43631-201ENSMUST00000202011 369 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 Gm44058-201ENSMUST00000204335 467 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Msh4Q99MT2 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.8□□□□□ -1.64
Msh4Q99MT2 Gm19599-201ENSMUST00000218898 358 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 Gm272-201ENSMUST00000222073 919 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.8□□□□□ -1.64
Msh4Q99MT2 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 AC150560.3-201ENSMUST00000227442 455 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 AC137902.2-201ENSMUST00000227989 576 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 Snord15b-201ENSMUST00000083032 145 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 Gm25818-201ENSMUST00000083282 164 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Msh4Q99MT2 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Msh4Q99MT2 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Msh4Q99MT2 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Msh4Q99MT2 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Msh4Q99MT2 Gm20679-201ENSMUST00000177285 1402 ntBASIC4.8□□□□□ -1.64
Msh4Q99MT2 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Msh4Q99MT2 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm12039-201ENSMUST00000118219 180 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm16345-201ENSMUST00000146065 158 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm4540-201ENSMUST00000170669 429 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Mir6411-201ENSMUST00000183556 108 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm27551-201ENSMUST00000184258 77 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm2147-201ENSMUST00000193588 639 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm18127-201ENSMUST00000208479 725 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm4052-201ENSMUST00000220890 451 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm24254-201ENSMUST00000083702 104 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Msh4Q99MT2 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.79□□□□□ -1.64
Msh4Q99MT2 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.79□□□□□ -1.64
Msh4Q99MT2 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm14050-201ENSMUST00000117052 346 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm15357-201ENSMUST00000119160 285 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.78□□□□□ -1.64
Msh4Q99MT2 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Msh4Q99MT2 Gm1866-201ENSMUST00000120701 477 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 333.3 ms