Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm27161-201ENSMUST00000183960 562 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Trbv24-201ENSMUST00000194614 347 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm42475-201ENSMUST00000201212 295 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm45870-201ENSMUST00000211269 601 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm8523-201ENSMUST00000211386 552 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 AC138284.2-201ENSMUST00000213982 567 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 AC156950.1-201ENSMUST00000219604 456 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm3785-201ENSMUST00000221000 202 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm17165-201ENSMUST00000096155 493 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.26□□□□□ -1.41
Clp1Q99LI9 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Clp1Q99LI9 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Clp1Q99LI9 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm45033-201ENSMUST00000206710 3167 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm8595-201ENSMUST00000118250 630 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm14871-201ENSMUST00000119056 194 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm14577-201ENSMUST00000121134 256 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm13973-201ENSMUST00000121371 894 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm15152-201ENSMUST00000121540 394 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm26255-201ENSMUST00000122492 103 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm16254-201ENSMUST00000131528 730 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Ear-ps3-201ENSMUST00000168308 445 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm4076-201ENSMUST00000179230 965 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm37070-201ENSMUST00000193272 460 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm19131-201ENSMUST00000203408 789 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm45023-201ENSMUST00000207951 379 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm19140-201ENSMUST00000209790 421 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm18587-201ENSMUST00000213736 841 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm19219-201ENSMUST00000215863 724 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm9845-201ENSMUST00000056409 598 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm24029-201ENSMUST00000083928 143 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm5746-201ENSMUST00000183550 2200 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.25□□□□□ -1.41
Clp1Q99LI9 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Clp1Q99LI9 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Clp1Q99LI9 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Clp1Q99LI9 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms