Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm9613-201ENSMUST00000171662 196 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm22166-201ENSMUST00000178419 121 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm7398-201ENSMUST00000178589 639 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm23288-201ENSMUST00000179213 121 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm7375-201ENSMUST00000179232 639 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm3681-201ENSMUST00000179940 639 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm5252-201ENSMUST00000189030 909 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm29552-201ENSMUST00000190548 660 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm8039-201ENSMUST00000204758 712 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm45700-201ENSMUST00000205866 347 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 AC192334.2-201ENSMUST00000223087 1091 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 AC174797.3-202ENSMUST00000224578 587 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 AC154598.1-201ENSMUST00000227079 347 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm10064-201ENSMUST00000071235 399 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm4963-201ENSMUST00000072718 378 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm22810-201ENSMUST00000082741 158 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 AW046200-203ENSMUST00000211787 2479 ntBASIC5.09□□□□□ -1.59
Clrn1Q8K445 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.09□□□□□ -1.59
Clrn1Q8K445 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.09□□□□□ -1.6
Clrn1Q8K445 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Clrn1Q8K445 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Clrn1Q8K445 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Clrn1Q8K445 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Clrn1Q8K445 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Clrn1Q8K445 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm3940-201ENSMUST00000105087 432 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm11970-201ENSMUST00000116105 320 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm13379-201ENSMUST00000118053 621 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm15387-201ENSMUST00000120421 648 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm25807-201ENSMUST00000122783 305 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm15946-201ENSMUST00000160654 423 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm17060-201ENSMUST00000172394 824 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm2092-201ENSMUST00000178887 639 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm2759-201ENSMUST00000179938 639 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm18291-201ENSMUST00000190791 301 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm37164-201ENSMUST00000192809 637 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm36939-201ENSMUST00000194889 439 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm5842-201ENSMUST00000195073 622 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Mir6516-201ENSMUST00000196236 110 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm43370-201ENSMUST00000196437 284 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm43505-201ENSMUST00000200579 139 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm17906-201ENSMUST00000202480 901 ntBASIC5.08□□□□□ -1.6
Clrn1Q8K445 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.08□□□□□ -1.6
Clrn1Q8K445 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms