Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm21856-201ENSMUST00000187547 696 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm18177-201ENSMUST00000188373 404 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm5252-201ENSMUST00000189030 909 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm21735-201ENSMUST00000190360 696 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm37288-201ENSMUST00000193963 334 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm43476-201ENSMUST00000197873 405 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 AC120011.1-201ENSMUST00000202147 744 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 AC165092.2-201ENSMUST00000224681 368 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm4991-201ENSMUST00000118899 1552 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Gm37407-201ENSMUST00000194793 1316 ntBASIC6.76□□□□□ -1.33
Usp40Q8BWR4 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm11409-201ENSMUST00000118621 403 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm13574-201ENSMUST00000120482 394 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm24477-201ENSMUST00000157438 103 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm26085-201ENSMUST00000157900 116 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm22726-201ENSMUST00000158089 179 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm24002-201ENSMUST00000158456 104 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm20954-201ENSMUST00000189078 644 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm18877-201ENSMUST00000207706 539 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm46327-201ENSMUST00000218240 365 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 AC163631.1-201ENSMUST00000225041 598 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 AC158392.2-201ENSMUST00000225402 969 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm26063-201ENSMUST00000083378 107 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Gm44144-201ENSMUST00000203683 1960 ntBASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Usp40Q8BWR4 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm18491-201ENSMUST00000192492 1594 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm24124-201ENSMUST00000104103 132 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm12392-201ENSMUST00000118014 938 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm12039-201ENSMUST00000118219 180 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Spanxn4-201ENSMUST00000172433 424 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Mir5101-201ENSMUST00000175181 83 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm18417-201ENSMUST00000176564 648 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Mir1957b-201ENSMUST00000184608 123 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Mir6943-201ENSMUST00000185186 66 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm4921-201ENSMUST00000219804 992 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 AV026068-220ENSMUST00000224153 1147 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 AC133654.1-201ENSMUST00000228411 672 ntBASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC6.74□□□□□ -1.33
Usp40Q8BWR4 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms