Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ddx55Q6ZPL9 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm24124-201ENSMUST00000104103 132 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm22019-201ENSMUST00000104359 96 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm17132-201ENSMUST00000109542 1158 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm12387-201ENSMUST00000118573 955 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm14560-201ENSMUST00000118672 375 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm5943-201ENSMUST00000119458 459 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm11484-201ENSMUST00000119808 338 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm25979-201ENSMUST00000157177 138 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm25907-201ENSMUST00000158486 125 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm8221-201ENSMUST00000178052 564 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Mir6960-201ENSMUST00000183449 61 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Mir7022-201ENSMUST00000183749 61 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm18802-201ENSMUST00000186270 888 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm29196-201ENSMUST00000189239 618 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm44058-201ENSMUST00000204335 467 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm2059-201ENSMUST00000212025 287 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Mecom-201ENSMUST00000061088 348 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ddx55Q6ZPL9 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm12186-201ENSMUST00000119050 945 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm6062-201ENSMUST00000120462 631 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm16412-201ENSMUST00000121602 273 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm25185-201ENSMUST00000157754 96 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm10177-202ENSMUST00000161698 207 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm17085-201ENSMUST00000165425 502 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Mir7222-201ENSMUST00000183740 75 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm43144-201ENSMUST00000198256 485 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm6988-201ENSMUST00000222676 375 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm24031-201ENSMUST00000083930 131 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ddx55Q6ZPL9 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ddx55Q6ZPL9 Gm42967-201ENSMUST00000198647 2312 ntBASIC5.65□□□□□ -1.5
Ddx55Q6ZPL9 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ddx55Q6ZPL9 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms