Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm13669-201ENSMUST00000122366 457 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm13602-201ENSMUST00000122405 493 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm25290-201ENSMUST00000122796 144 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm25013-201ENSMUST00000158402 128 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm17142-201ENSMUST00000164933 645 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm6486-201ENSMUST00000166202 434 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm24812-201ENSMUST00000175315 284 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm23568-201ENSMUST00000177960 92 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm24829-201ENSMUST00000179245 92 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm26968-201ENSMUST00000182894 481 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm44348-201ENSMUST00000200165 122 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm45724-201ENSMUST00000213031 420 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 AC101677.1-201ENSMUST00000218590 158 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 AC168059.1-201ENSMUST00000225846 841 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 AC161758.1-201ENSMUST00000226123 310 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Rnf220Q6PDX6 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Mir669l-201ENSMUST00000103771 98 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm12543-201ENSMUST00000120410 543 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm11848-201ENSMUST00000121207 973 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm11882-201ENSMUST00000121463 506 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm6872-201ENSMUST00000165001 700 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm22307-201ENSMUST00000180019 107 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Rnf220Q6PDX6 Olfr512-201ENSMUST00000074730 1056 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms