Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim28Q62318 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim28Q62318 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trim28Q62318 Gm23423-201ENSMUST00000082782 106 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Mir463-201ENSMUST00000093570 75 ntBASIC6.15□□□□□ -1.42
Trim28Q62318 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
Trim28Q62318 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Trim28Q62318 Gm45644-201ENSMUST00000210255 2740 ntBASIC6.15□□□□□ -1.43
Trim28Q62318 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.15□□□□□ -1.43
Trim28Q62318 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Trim28Q62318 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Trim28Q62318 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim28Q62318 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Trim28Q62318 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim28Q62318 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trim28Q62318 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Trim28Q62318 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim28Q62318 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Trim28Q62318 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim28Q62318 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim28Q62318 Gm13501-201ENSMUST00000118477 979 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim28Q62318 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC6.14□□□□□ -1.43
Trim28Q62318 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC6.14□□□□□ -1.43
Trim28Q62318 Gm23023-201ENSMUST00000158767 109 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Gm7281-201ENSMUST00000160010 543 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Ear-ps10-201ENSMUST00000161871 460 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Gm6155-201ENSMUST00000173735 341 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC6.14□□□□□ -1.43
Trim28Q62318 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim28Q62318 Gm6445-201ENSMUST00000189515 1112 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim28Q62318 Gm37710-201ENSMUST00000193501 1274 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Gm37404-201ENSMUST00000195726 359 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Gm43238-201ENSMUST00000196463 359 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Gm8069-201ENSMUST00000197887 154 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Gm43848-201ENSMUST00000198060 1247 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
Trim28Q62318 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim28Q62318 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC6.14□□□□□ -1.43
Trim28Q62318 AC158981.3-202ENSMUST00000228906 523 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC6.14□□□□□ -1.43
Trim28Q62318 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim28Q62318 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim28Q62318 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim28Q62318 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trim28Q62318 Gm43490-201ENSMUST00000197593 2652 ntBASIC6.14□□□□□ -1.43
Trim28Q62318 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim28Q62318 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.14□□□□□ -1.43
Trim28Q62318 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim28Q62318 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim28Q62318 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trim28Q62318 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Trim28Q62318 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Trim28Q62318 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim28Q62318 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim28Q62318 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
Trim28Q62318 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Trim28Q62318 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Trim28Q62318 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim28Q62318 Gm22473-201ENSMUST00000104114 132 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim28Q62318 Gm11914-201ENSMUST00000117094 507 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Gm15752-201ENSMUST00000117427 394 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Gm11357-201ENSMUST00000119758 954 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Trim28Q62318 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim28Q62318 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim28Q62318 Gm22038-201ENSMUST00000157277 242 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Gm24960-201ENSMUST00000157923 90 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Gm3091-201ENSMUST00000163408 484 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trim28Q62318 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC6.13□□□□□ -1.43
Trim28Q62318 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim28Q62318 Mir6943-201ENSMUST00000185186 66 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim28Q62318 Gm37030-201ENSMUST00000194254 295 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Gm42999-201ENSMUST00000198049 786 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Gm43344-201ENSMUST00000198723 1229 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Gm43004-201ENSMUST00000201872 703 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Gm5317-201ENSMUST00000204445 847 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim28Q62318 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim28Q62318 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim28Q62318 Gm6988-201ENSMUST00000222676 375 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 AC116395.1-201ENSMUST00000225480 1143 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trim28Q62318 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Trim28Q62318 Snord59a-201ENSMUST00000082844 74 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Gm22971-201ENSMUST00000083305 97 ntBASIC6.13□□□□□ -1.43
Trim28Q62318 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim28Q62318 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim28Q62318 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms