Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm24444-201ENSMUST00000157244 308 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm24939-201ENSMUST00000158325 137 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm28094-201ENSMUST00000185262 390 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm29228-201ENSMUST00000185489 418 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm28385-201ENSMUST00000185671 292 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm35702-201ENSMUST00000198653 511 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm8132-201ENSMUST00000204938 640 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 CR974429.1-201ENSMUST00000220877 827 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm6863-201ENSMUST00000052882 636 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Mir504-201ENSMUST00000093602 79 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.59□□□□□ -1.83
Trav5d-4Q5R1F6 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Trav5d-4Q5R1F6 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Trav5d-4Q5R1F6 Gm42671-201ENSMUST00000198013 1604 ntBASIC3.59□□□□□ -1.84
Trav5d-4Q5R1F6 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Trav5d-4Q5R1F6 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm42455-201ENSMUST00000199761 2736 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm7754-201ENSMUST00000223075 2064 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm14365-201ENSMUST00000117535 587 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm11866-201ENSMUST00000120209 335 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm12340-201ENSMUST00000121617 462 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm19503-201ENSMUST00000187109 241 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm37878-201ENSMUST00000192108 387 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm44604-201ENSMUST00000205475 496 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm44521-201ENSMUST00000206469 217 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm8724-201ENSMUST00000081668 483 ntBASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Trav5d-4Q5R1F6 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm24788-201ENSMUST00000104283 156 ntBASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm23226-201ENSMUST00000116927 103 ntBASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm14688-201ENSMUST00000119169 303 ntBASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Llph-ps1-201ENSMUST00000121281 390 ntBASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Llph-ps2-201ENSMUST00000122000 393 ntBASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm14122-201ENSMUST00000122076 973 ntBASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm4912-201ENSMUST00000122212 1044 ntBASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm24224-201ENSMUST00000158828 258 ntBASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm27899-201ENSMUST00000184715 64 ntBASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm28263-201ENSMUST00000185884 400 ntBASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm28871-201ENSMUST00000186191 687 ntBASIC3.57□□□□□ -1.84
Trav5d-4Q5R1F6 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms