Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Gm38217-201ENSMUST00000194358 910 ntBASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Gm17766-201ENSMUST00000209223 442 ntBASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Gm9472-201ENSMUST00000221625 526 ntBASIC5.21□□□□□ -1.58
Trim58Q5NCC9 AC154838.2-201ENSMUST00000226602 747 ntBASIC5.21□□□□□ -1.58
Trim58Q5NCC9 AC119573.1-201ENSMUST00000227960 757 ntBASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Trim58Q5NCC9 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim58Q5NCC9 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.21□□□□□ -1.58
Trim58Q5NCC9 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Trim58Q5NCC9 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim58Q5NCC9 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm13121-201ENSMUST00000120637 632 ntBASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm25965-201ENSMUST00000157170 93 ntBASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm23215-201ENSMUST00000178153 121 ntBASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm8823-201ENSMUST00000193158 433 ntBASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm42927-201ENSMUST00000200624 3841 ntBASIC5.2□□□□□ -1.58
Trim58Q5NCC9 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim58Q5NCC9 AC162183.1-202ENSMUST00000225434 904 ntBASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Mir383-201ENSMUST00000083523 70 ntBASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Trim58Q5NCC9 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim58Q5NCC9 AC168056.3-201ENSMUST00000225395 2540 ntBASIC5.19□□□□□ -1.58
Trim58Q5NCC9 n-R5s30-201ENSMUST00000122624 122 ntBASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Gm22378-201ENSMUST00000157481 111 ntBASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Gm5252-201ENSMUST00000189030 909 ntBASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Gm43124-201ENSMUST00000201878 278 ntBASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Gm44371-201ENSMUST00000204148 467 ntBASIC5.19□□□□□ -1.58
Trim58Q5NCC9 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.19□□□□□ -1.58
Trim58Q5NCC9 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Gm26063-201ENSMUST00000083378 107 ntBASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim58Q5NCC9 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.19□□□□□ -1.58
Trim58Q5NCC9 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim58Q5NCC9 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm43178-201ENSMUST00000197257 1386 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim58Q5NCC9 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm4596-201ENSMUST00000117197 442 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm13501-201ENSMUST00000118477 979 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm12988-201ENSMUST00000119054 478 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm14688-201ENSMUST00000119169 303 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm12190-201ENSMUST00000120001 187 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm11349-201ENSMUST00000122209 1116 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm13487-201ENSMUST00000122240 864 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm27414-201ENSMUST00000185033 381 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm8282-201ENSMUST00000187559 483 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm6776-201ENSMUST00000057752 900 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm12586-201ENSMUST00000117328 1316 ntBASIC5.18□□□□□ -1.58
Trim58Q5NCC9 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim58Q5NCC9 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms