Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Ccdc88bQ4QRL3 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Ccdc88bQ4QRL3 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Gm43715-201ENSMUST00000196307 2715 ntBASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Gm37053-201ENSMUST00000192399 2087 ntBASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Gm14516-201ENSMUST00000120012 252 ntBASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Gm24850-201ENSMUST00000158029 119 ntBASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Gm23198-201ENSMUST00000158811 91 ntBASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Mir6914-201ENSMUST00000184999 69 ntBASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Gm22897-202ENSMUST00000197782 127 ntBASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr713-201ENSMUST00000098139 975 ntBASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC6.76□□□□□ -1.33
Ccdc88bQ4QRL3 Gm5117-201ENSMUST00000178878 2553 ntBASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Gm14383-201ENSMUST00000121637 386 ntBASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Gm23112-201ENSMUST00000158606 125 ntBASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Mir6385-201ENSMUST00000184295 105 ntBASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Gm4644-201ENSMUST00000197587 400 ntBASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Gm42453-201ENSMUST00000200477 409 ntBASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Gm17829-201ENSMUST00000219782 344 ntBASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 AC140368.1-202ENSMUST00000226131 658 ntBASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Gm16332-201ENSMUST00000134229 2967 ntBASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Gm37045-201ENSMUST00000192016 2463 ntBASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Ccdc88bQ4QRL3 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Gm27308-201ENSMUST00000184807 233 ntBASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Gm37603-201ENSMUST00000192368 219 ntBASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 AC161054.1-201ENSMUST00000214319 184 ntBASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Mir370-201ENSMUST00000083499 79 ntBASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Ankrd28-204ENSMUST00000227089 3522 ntBASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Gm9911-201ENSMUST00000211467 2802 ntBASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Ccdc88bQ4QRL3 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm9836-201ENSMUST00000117132 216 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm12982-201ENSMUST00000117408 190 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm12149-201ENSMUST00000117511 654 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm15783-201ENSMUST00000117521 633 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm11645-201ENSMUST00000121589 649 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm23667-201ENSMUST00000157466 120 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm28396-201ENSMUST00000190309 379 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm5185-201ENSMUST00000080271 619 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm25200-201ENSMUST00000083094 130 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Fbxw23-202ENSMUST00000198480 1388 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm42616-201ENSMUST00000198989 4184 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm36931-201ENSMUST00000192997 4801 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm11781-201ENSMUST00000118328 472 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm15166-201ENSMUST00000120790 385 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm11403-201ENSMUST00000122195 369 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm2862-201ENSMUST00000161524 328 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm5066-201ENSMUST00000188479 822 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm29747-201ENSMUST00000194764 585 ntBASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC6.73□□□□□ -1.33
Ccdc88bQ4QRL3 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 314.8 ms