Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim40Q3UWA4 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm23709-201ENSMUST00000104364 130 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm12387-201ENSMUST00000118573 955 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm3267-201ENSMUST00000118671 473 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm13359-201ENSMUST00000119000 695 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm13537-201ENSMUST00000120467 267 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm13000-201ENSMUST00000120937 496 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm22106-201ENSMUST00000122544 127 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm12854-201ENSMUST00000128518 297 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm10059-201ENSMUST00000131139 171 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm23046-201ENSMUST00000158369 284 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm28017-201ENSMUST00000183434 126 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm27976-201ENSMUST00000183635 162 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm6137-201ENSMUST00000187552 578 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm20776-201ENSMUST00000189940 700 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm43774-201ENSMUST00000196327 878 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm43491-201ENSMUST00000197133 784 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm44554-201ENSMUST00000208738 147 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm7665-201ENSMUST00000076710 297 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Mir28a-201ENSMUST00000083560 86 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.19□□□□□ -1.74
Trim40Q3UWA4 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm15058-201ENSMUST00000117689 458 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm14599-201ENSMUST00000120469 474 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm15926-201ENSMUST00000120492 550 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm13677-201ENSMUST00000120739 595 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm13508-201ENSMUST00000121639 775 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm22895-201ENSMUST00000157508 308 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm23537-201ENSMUST00000157536 330 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm8358-201ENSMUST00000167222 555 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Samd15-201ENSMUST00000169669 1194 ntBASIC4.18□□□□□ -1.74
Trim40Q3UWA4 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms