Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm20701-201ENSMUST00000176082 347 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm27254-201ENSMUST00000183926 517 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Mir6537-201ENSMUST00000184150 110 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm29428-201ENSMUST00000190086 409 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm37996-201ENSMUST00000191859 367 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm44003-201ENSMUST00000203024 490 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm44032-201ENSMUST00000204841 166 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm39197-201ENSMUST00000212069 457 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Upf3bQ3ULL6 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.53□□□□□ -1.69
Upf3bQ3ULL6 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm24788-201ENSMUST00000104283 156 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm26354-201ENSMUST00000158221 129 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm28094-201ENSMUST00000185262 390 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm29634-201ENSMUST00000188467 696 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm28699-201ENSMUST00000189193 696 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm29196-201ENSMUST00000189239 618 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm43370-201ENSMUST00000196437 284 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Mir383-201ENSMUST00000083523 70 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm23875-201ENSMUST00000083711 318 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Upf3bQ3ULL6 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Mir761-201ENSMUST00000103245 76 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Gm23948-201ENSMUST00000104030 132 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Gm23226-201ENSMUST00000116927 103 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Clec2f-201ENSMUST00000121051 374 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Gm12807-201ENSMUST00000121546 962 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Gm22453-201ENSMUST00000122801 318 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Mir5112-201ENSMUST00000174897 60 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Gm40598-201ENSMUST00000222953 547 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Gm7093-201ENSMUST00000223004 581 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Upf3bQ3ULL6 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm26019-201ENSMUST00000104407 119 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm11432-201ENSMUST00000117334 231 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm13501-201ENSMUST00000118477 979 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm15212-201ENSMUST00000122403 466 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms