Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm16179-201ENSMUST00000120685 373 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm11606-201ENSMUST00000120706 617 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm3216-201ENSMUST00000166927 486 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm3141-201ENSMUST00000168726 499 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm20648-201ENSMUST00000175815 328 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm27905-201ENSMUST00000184005 207 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm27919-201ENSMUST00000185163 107 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm6057-201ENSMUST00000195927 314 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm6543-201ENSMUST00000197353 808 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm43505-201ENSMUST00000200579 139 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm43224-201ENSMUST00000201567 898 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm8719-201ENSMUST00000203602 534 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm45344-201ENSMUST00000211610 341 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm18557-201ENSMUST00000218710 433 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm4921-201ENSMUST00000219804 992 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Zfp429-203ENSMUST00000224684 524 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm7099-201ENSMUST00000080066 554 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm23407-201ENSMUST00000082538 91 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm16436-201ENSMUST00000121510 1607 ntBASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Usp39Q3TIX9 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm6134-201ENSMUST00000117265 171 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm14982-201ENSMUST00000121102 442 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm15885-201ENSMUST00000122114 388 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm2892-201ENSMUST00000145537 711 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm24438-201ENSMUST00000157893 115 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm28017-201ENSMUST00000183434 126 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm28596-201ENSMUST00000185870 696 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm28802-201ENSMUST00000188624 944 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Trbv22-201ENSMUST00000191697 291 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm32295-201ENSMUST00000192558 696 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm31260-201ENSMUST00000193478 696 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm18340-201ENSMUST00000196342 609 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm22897-202ENSMUST00000197782 127 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Ighv1-68-201ENSMUST00000198789 294 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm43794-201ENSMUST00000200971 692 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm2011-203ENSMUST00000203750 435 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm43897-201ENSMUST00000204019 309 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm44074-201ENSMUST00000204562 337 ntBASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Usp39Q3TIX9 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms