Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sox9Q04887 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sox9Q04887 Gm25096-201ENSMUST00000104043 129 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Gm15297-201ENSMUST00000117795 290 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.62□□□□□ -1.51
Sox9Q04887 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox9Q04887 Gm16114-201ENSMUST00000161930 300 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.62□□□□□ -1.51
Sox9Q04887 Gm23269-201ENSMUST00000178701 107 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.62□□□□□ -1.51
Sox9Q04887 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC5.62□□□□□ -1.51
Sox9Q04887 Gm27387-201ENSMUST00000184583 116 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Gm28116-201ENSMUST00000189064 387 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC5.62□□□□□ -1.51
Sox9Q04887 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.62□□□□□ -1.51
Sox9Q04887 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox9Q04887 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Gm43578-201ENSMUST00000201250 459 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Gm3189-201ENSMUST00000205595 832 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Gm18597-201ENSMUST00000209519 694 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox9Q04887 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Gm46234-201ENSMUST00000218702 259 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 AC120540.1-201ENSMUST00000221879 324 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox9Q04887 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Sox9Q04887 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox9Q04887 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Sox9Q04887 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sox9Q04887 Gm22220-201ENSMUST00000082671 149 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox9Q04887 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sox9Q04887 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.62□□□□□ -1.51
Sox9Q04887 Gm7133-201ENSMUST00000187797 2039 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sox9Q04887 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sox9Q04887 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.62□□□□□ -1.51
Sox9Q04887 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox9Q04887 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox9Q04887 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
Sox9Q04887 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox9Q04887 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm11943-201ENSMUST00000119473 327 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm12190-201ENSMUST00000120001 187 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm14563-201ENSMUST00000120571 354 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm13339-201ENSMUST00000120651 510 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm14620-201ENSMUST00000120656 383 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm25176-201ENSMUST00000122640 125 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm15905-201ENSMUST00000137042 298 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm3362-201ENSMUST00000148102 466 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm24188-201ENSMUST00000157980 108 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm26354-201ENSMUST00000158221 129 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm18396-201ENSMUST00000177095 361 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.61□□□□□ -1.51
Sox9Q04887 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm8458-201ENSMUST00000196658 819 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm42622-201ENSMUST00000197229 355 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm6070-201ENSMUST00000207275 419 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm18924-201ENSMUST00000211929 316 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox9Q04887 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox9Q04887 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox9Q04887 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm8681-201ENSMUST00000219115 618 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm8158-201ENSMUST00000219220 465 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Gm8112-201ENSMUST00000219637 465 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox9Q04887 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox9Q04887 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox9Q04887 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sox9Q04887 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sox9Q04887 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sox9Q04887 Gm26064-201ENSMUST00000083381 109 ntBASIC5.61□□□□□ -1.51
Sox9Q04887 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sox9Q04887 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Sox9Q04887 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sox9Q04887 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox9Q04887 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sox9Q04887 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sox9Q04887 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Sox9Q04887 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms