Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkx3-1P97436 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.72□□□□□ -1.81
Nkx3-1P97436 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm5757-201ENSMUST00000117494 528 ntBASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm25177-201ENSMUST00000122634 117 ntBASIC3.72□□□□□ -1.81
Nkx3-1P97436 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm27036-201ENSMUST00000182465 980 ntBASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm27695-201ENSMUST00000184301 91 ntBASIC3.72□□□□□ -1.81
Nkx3-1P97436 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm44002-201ENSMUST00000205134 594 ntBASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm18306-201ENSMUST00000207338 569 ntBASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm45157-201ENSMUST00000208729 401 ntBASIC3.72□□□□□ -1.81
Nkx3-1P97436 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm46998-201ENSMUST00000221444 330 ntBASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Gm29325-201ENSMUST00000190705 2528 ntBASIC3.72□□□□□ -1.81
Nkx3-1P97436 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Nkx3-1P97436 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Nkx3-1P97436 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.71□□□□□ -1.81
Nkx3-1P97436 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Nkx3-1P97436 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Nkx3-1P97436 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm7834-201ENSMUST00000117560 437 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm11448-201ENSMUST00000120427 450 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm25104-201ENSMUST00000122476 163 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm15795-201ENSMUST00000160969 553 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm25999-201ENSMUST00000175398 133 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm37601-201ENSMUST00000194922 394 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm19104-201ENSMUST00000198392 679 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm43559-201ENSMUST00000198755 466 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm4410-201ENSMUST00000199349 686 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm44023-201ENSMUST00000203710 469 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm45498-201ENSMUST00000210346 283 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 AC132121.1-201ENSMUST00000220774 332 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC3.71□□□□□ -1.82
Nkx3-1P97436 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm37053-201ENSMUST00000192399 2087 ntBASIC3.71□□□□□ -1.82
Nkx3-1P97436 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nkx3-1P97436 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nkx3-1P97436 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nkx3-1P97436 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Nkx3-1P97436 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx3-1P97436 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx3-1P97436 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Nkx3-1P97436 Gm25420-201ENSMUST00000104216 127 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 Gm24792-201ENSMUST00000104286 128 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 Gm10552-201ENSMUST00000113396 372 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 Mir1193-201ENSMUST00000116761 121 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 Gm12173-201ENSMUST00000117622 273 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 Gm13902-201ENSMUST00000120168 605 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 Gm12340-201ENSMUST00000121617 462 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx3-1P97436 Gm24503-201ENSMUST00000158454 135 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 Gm16545-201ENSMUST00000161968 463 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 Gm22859-201ENSMUST00000174978 122 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 Gm22698-201ENSMUST00000175375 108 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 Gm20673-201ENSMUST00000177167 430 ntBASIC3.7□□□□□ -1.82
Nkx3-1P97436 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.7□□□□□ -1.82
Nkx3-1P97436 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx3-1P97436 Gm9245-201ENSMUST00000200528 983 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms