Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5□□□□□ -1.61
CiitaP79621 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC5□□□□□ -1.61
CiitaP79621 Gm16566-201ENSMUST00000160387 910 ntBASIC5□□□□□ -1.61
CiitaP79621 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5□□□□□ -1.61
CiitaP79621 Gm16285-201ENSMUST00000162999 347 ntBASIC5□□□□□ -1.61
CiitaP79621 Mir6238-201ENSMUST00000184140 129 ntBASIC5□□□□□ -1.61
CiitaP79621 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5□□□□□ -1.61
CiitaP79621 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5□□□□□ -1.61
CiitaP79621 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5□□□□□ -1.61
CiitaP79621 Gm22897-201ENSMUST00000197860 128 ntBASIC5□□□□□ -1.61
CiitaP79621 Gm42666-201ENSMUST00000201954 152 ntBASIC5□□□□□ -1.61
CiitaP79621 Gm29793-201ENSMUST00000202874 460 ntBASIC5□□□□□ -1.61
CiitaP79621 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5□□□□□ -1.61
CiitaP79621 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5□□□□□ -1.61
CiitaP79621 Gm17987-201ENSMUST00000206902 603 ntBASIC5□□□□□ -1.61
CiitaP79621 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5□□□□□ -1.61
CiitaP79621 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CiitaP79621 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC5□□□□□ -1.61
CiitaP79621 Gm5373-201ENSMUST00000212113 1050 ntBASIC5□□□□□ -1.61
CiitaP79621 Gm4263-202ENSMUST00000221392 667 ntBASIC5□□□□□ -1.61
CiitaP79621 Gm6988-201ENSMUST00000222676 375 ntBASIC5□□□□□ -1.61
CiitaP79621 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5□□□□□ -1.61
CiitaP79621 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5□□□□□ -1.61
CiitaP79621 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CiitaP79621 Gm26437-201ENSMUST00000082595 105 ntBASIC5□□□□□ -1.61
CiitaP79621 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
CiitaP79621 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CiitaP79621 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CiitaP79621 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CiitaP79621 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5□□□□□ -1.61
CiitaP79621 Gm44321-201ENSMUST00000204262 2855 ntBASIC5□□□□□ -1.61
CiitaP79621 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CiitaP79621 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CiitaP79621 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CiitaP79621 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CiitaP79621 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CiitaP79621 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Gm11914-201ENSMUST00000117094 507 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Gm13902-201ENSMUST00000120168 605 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Gm7846-201ENSMUST00000145844 274 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.99□□□□□ -1.61
CiitaP79621 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CiitaP79621 Gm37095-201ENSMUST00000195421 205 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Gm44054-201ENSMUST00000203814 372 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Gm44088-201ENSMUST00000204595 237 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Gm18855-201ENSMUST00000206689 570 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Gm45200-201ENSMUST00000207434 919 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CiitaP79621 Gm45189-201ENSMUST00000208567 363 ntBASIC4.99□□□□□ -1.61
CiitaP79621 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CiitaP79621 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CiitaP79621 Fus-202ENSMUST00000079045 2623 ntBASIC4.99□□□□□ -1.61
CiitaP79621 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CiitaP79621 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CiitaP79621 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
CiitaP79621 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CiitaP79621 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CiitaP79621 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
CiitaP79621 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CiitaP79621 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CiitaP79621 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Gm12387-201ENSMUST00000118573 955 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Gm7312-201ENSMUST00000118798 469 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Gm13787-201ENSMUST00000120422 168 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Gm5391-201ENSMUST00000121155 613 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Gm25806-201ENSMUST00000122782 122 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Gm25290-201ENSMUST00000122796 144 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC4.98□□□□□ -1.61
CiitaP79621 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CiitaP79621 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.98□□□□□ -1.61
CiitaP79621 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CiitaP79621 Gm25598-201ENSMUST00000179031 107 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Gm16378-201ENSMUST00000179168 342 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Gm27864-201ENSMUST00000183704 190 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.98□□□□□ -1.61
CiitaP79621 Gm5885-202ENSMUST00000203357 528 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC4.98□□□□□ -1.61
CiitaP79621 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.98□□□□□ -1.61
CiitaP79621 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CiitaP79621 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CiitaP79621 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CiitaP79621 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CiitaP79621 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.98□□□□□ -1.61
CiitaP79621 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CiitaP79621 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
CiitaP79621 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CiitaP79621 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CiitaP79621 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CiitaP79621 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms