Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.86□□□□□ -1.63
NcanP55066 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.86□□□□□ -1.63
NcanP55066 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NcanP55066 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NcanP55066 Gm18491-201ENSMUST00000192492 1594 ntBASIC4.86□□□□□ -1.63
NcanP55066 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
NcanP55066 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
NcanP55066 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NcanP55066 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.86□□□□□ -1.63
NcanP55066 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.86□□□□□ -1.63
NcanP55066 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.85□□□□□ -1.63
NcanP55066 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NcanP55066 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NcanP55066 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
NcanP55066 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
NcanP55066 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
NcanP55066 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NcanP55066 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NcanP55066 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.85□□□□□ -1.63
NcanP55066 Gm11212-201ENSMUST00000118337 618 ntBASIC4.85□□□□□ -1.63
NcanP55066 Gm13924-201ENSMUST00000119899 486 ntBASIC4.85□□□□□ -1.63
NcanP55066 Gm14831-201ENSMUST00000120253 409 ntBASIC4.85□□□□□ -1.63
NcanP55066 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC4.85□□□□□ -1.63
NcanP55066 Gm10357-201ENSMUST00000159886 264 ntBASIC4.85□□□□□ -1.63
NcanP55066 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
NcanP55066 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NcanP55066 Gm21827-201ENSMUST00000178247 423 ntBASIC4.85□□□□□ -1.63
NcanP55066 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.85□□□□□ -1.63
NcanP55066 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NcanP55066 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.85□□□□□ -1.63
NcanP55066 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.85□□□□□ -1.63
NcanP55066 Gm45157-201ENSMUST00000208729 401 ntBASIC4.85□□□□□ -1.63
NcanP55066 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.85□□□□□ -1.63
NcanP55066 Gm8137-201ENSMUST00000218997 463 ntBASIC4.85□□□□□ -1.63
NcanP55066 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NcanP55066 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
NcanP55066 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.85□□□□□ -1.63
NcanP55066 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.85□□□□□ -1.63
NcanP55066 AC137871.2-201ENSMUST00000226482 289 ntBASIC4.85□□□□□ -1.63
NcanP55066 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.85□□□□□ -1.63
NcanP55066 AC130673.2-201ENSMUST00000228091 797 ntBASIC4.85□□□□□ -1.63
NcanP55066 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NcanP55066 Gm23925-201ENSMUST00000082471 132 ntBASIC4.85□□□□□ -1.63
NcanP55066 Gm22739-201ENSMUST00000083437 160 ntBASIC4.85□□□□□ -1.63
NcanP55066 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.85□□□□□ -1.63
NcanP55066 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
NcanP55066 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NcanP55066 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.85□□□□□ -1.63
NcanP55066 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NcanP55066 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NcanP55066 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NcanP55066 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NcanP55066 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
NcanP55066 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.84□□□□□ -1.63
NcanP55066 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NcanP55066 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NcanP55066 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.84□□□□□ -1.63
NcanP55066 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
NcanP55066 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NcanP55066 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
NcanP55066 Gm38067-201ENSMUST00000192346 1911 ntBASIC4.84□□□□□ -1.63
NcanP55066 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
NcanP55066 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NcanP55066 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
NcanP55066 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NcanP55066 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NcanP55066 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NcanP55066 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NcanP55066 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
NcanP55066 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.84□□□□□ -1.63
NcanP55066 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
NcanP55066 Mir466i-201ENSMUST00000116924 121 ntBASIC4.84□□□□□ -1.63
NcanP55066 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.84□□□□□ -1.63
NcanP55066 Gm12252-201ENSMUST00000119517 219 ntBASIC4.84□□□□□ -1.63
NcanP55066 Gm25104-201ENSMUST00000122476 163 ntBASIC4.84□□□□□ -1.63
NcanP55066 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.84□□□□□ -1.63
NcanP55066 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NcanP55066 Gm26490-201ENSMUST00000157879 140 ntBASIC4.84□□□□□ -1.63
NcanP55066 Gm25861-201ENSMUST00000158251 109 ntBASIC4.84□□□□□ -1.63
NcanP55066 Gm22116-201ENSMUST00000158791 141 ntBASIC4.84□□□□□ -1.63
NcanP55066 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NcanP55066 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.84□□□□□ -1.63
NcanP55066 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NcanP55066 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NcanP55066 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.84□□□□□ -1.63
NcanP55066 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.84□□□□□ -1.63
NcanP55066 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.84□□□□□ -1.63
NcanP55066 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.84□□□□□ -1.63
NcanP55066 Gm18320-201ENSMUST00000211304 595 ntBASIC4.84□□□□□ -1.63
NcanP55066 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC4.84□□□□□ -1.63
NcanP55066 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC4.84□□□□□ -1.63
NcanP55066 Gm18116-201ENSMUST00000220920 537 ntBASIC4.84□□□□□ -1.63
NcanP55066 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.84□□□□□ -1.63
NcanP55066 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NcanP55066 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.84□□□□□ -1.63
NcanP55066 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
NcanP55066 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NcanP55066 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
NcanP55066 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NcanP55066 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.84□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms