Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm9597-202ENSMUST00000227632 1387 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Atxn1P54254 Gm22468-201ENSMUST00000116680 120 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm26248-201ENSMUST00000116700 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm26137-201ENSMUST00000116701 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm26190-201ENSMUST00000116704 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm24617-201ENSMUST00000116705 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm25778-201ENSMUST00000116713 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm25774-201ENSMUST00000116717 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm22102-201ENSMUST00000116730 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm23177-201ENSMUST00000116784 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm24193-201ENSMUST00000116801 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm24744-201ENSMUST00000116833 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm24427-201ENSMUST00000116896 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm22346-201ENSMUST00000116918 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm23606-201ENSMUST00000116938 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm22029-201ENSMUST00000116940 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm26298-201ENSMUST00000116956 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm23844-201ENSMUST00000116959 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm24484-201ENSMUST00000117009 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm25347-201ENSMUST00000117026 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm22112-201ENSMUST00000117032 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm16053-201ENSMUST00000120511 188 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm25103-201ENSMUST00000122671 318 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.97□□□□□ -1.61
Atxn1P54254 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Atxn1P54254 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC4.97□□□□□ -1.61
Atxn1P54254 Gm16147-201ENSMUST00000162143 373 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Atxn1P54254 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC4.97□□□□□ -1.61
Atxn1P54254 Gm18522-201ENSMUST00000173947 650 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm22991-201ENSMUST00000178126 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm25754-201ENSMUST00000178653 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm22419-201ENSMUST00000178780 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm24802-201ENSMUST00000178897 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm25208-201ENSMUST00000178964 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm24567-201ENSMUST00000179294 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm23943-201ENSMUST00000179712 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm25228-201ENSMUST00000180121 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm23304-201ENSMUST00000180209 121 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Atxn1P54254 Gm27033-201ENSMUST00000183226 544 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm27568-201ENSMUST00000184220 99 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Mir6412-201ENSMUST00000184477 97 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Atxn1P54254 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.97□□□□□ -1.61
Atxn1P54254 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC4.97□□□□□ -1.61
Atxn1P54254 Gm43925-201ENSMUST00000203498 206 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.97□□□□□ -1.61
Atxn1P54254 Gm45551-201ENSMUST00000211459 928 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Atxn1P54254 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Atxn1P54254 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
Atxn1P54254 AC130673.2-201ENSMUST00000228091 797 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Atxn1P54254 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Atxn1P54254 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Atxn1P54254 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Atxn1P54254 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Atxn1P54254 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Atxn1P54254 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Atxn1P54254 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.97□□□□□ -1.61
Atxn1P54254 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Atxn1P54254 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.97□□□□□ -1.61
Atxn1P54254 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
Atxn1P54254 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Atxn1P54254 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.96□□□□□ -1.61
Atxn1P54254 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.96□□□□□ -1.62
Atxn1P54254 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Atxn1P54254 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.96□□□□□ -1.62
Atxn1P54254 Gm45263-201ENSMUST00000210377 1375 ntBASIC4.96□□□□□ -1.62
Atxn1P54254 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Atxn1P54254 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Atxn1P54254 Defa-ps1-201ENSMUST00000119062 282 ntBASIC4.96□□□□□ -1.62
Atxn1P54254 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Atxn1P54254 Gm11278-201ENSMUST00000121002 997 ntBASIC4.96□□□□□ -1.62
Atxn1P54254 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.96□□□□□ -1.62
Atxn1P54254 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.96□□□□□ -1.62
Atxn1P54254 Defa-ps6-201ENSMUST00000122172 282 ntBASIC4.96□□□□□ -1.62
Atxn1P54254 Gm22345-201ENSMUST00000122644 107 ntBASIC4.96□□□□□ -1.62
Atxn1P54254 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.96□□□□□ -1.62
Atxn1P54254 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Atxn1P54254 Gm25713-201ENSMUST00000158625 109 ntBASIC4.96□□□□□ -1.62
Atxn1P54254 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Atxn1P54254 Gm18128-201ENSMUST00000172625 511 ntBASIC4.96□□□□□ -1.62
Atxn1P54254 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Atxn1P54254 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Atxn1P54254 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Atxn1P54254 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Atxn1P54254 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Atxn1P54254 Gm25944-201ENSMUST00000178758 94 ntBASIC4.96□□□□□ -1.62
Atxn1P54254 Gm2092-201ENSMUST00000178887 639 ntBASIC4.96□□□□□ -1.62
Atxn1P54254 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Atxn1P54254 Gm2759-201ENSMUST00000179938 639 ntBASIC4.96□□□□□ -1.62
Atxn1P54254 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms