Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm28625-201ENSMUST00000188309 205 ntBASIC5.98□□□□□ -1.45
Sox1P53783 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sox1P53783 Gm38050-201ENSMUST00000191904 238 ntBASIC5.98□□□□□ -1.45
Sox1P53783 Gm37421-201ENSMUST00000193088 132 ntBASIC5.98□□□□□ -1.45
Sox1P53783 Gm36985-201ENSMUST00000195595 379 ntBASIC5.98□□□□□ -1.45
Sox1P53783 Gm29778-201ENSMUST00000201667 466 ntBASIC5.98□□□□□ -1.45
Sox1P53783 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sox1P53783 Gm19196-201ENSMUST00000209258 357 ntBASIC5.98□□□□□ -1.45
Sox1P53783 Gm45742-201ENSMUST00000212400 433 ntBASIC5.98□□□□□ -1.45
Sox1P53783 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC5.98□□□□□ -1.45
Sox1P53783 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Sox1P53783 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Sox1P53783 Gm24928-201ENSMUST00000083399 107 ntBASIC5.98□□□□□ -1.45
Sox1P53783 Gm23093-201ENSMUST00000083450 102 ntBASIC5.98□□□□□ -1.45
Sox1P53783 Gm25897-201ENSMUST00000083709 107 ntBASIC5.98□□□□□ -1.45
Sox1P53783 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox1P53783 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Sox1P53783 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Sox1P53783 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox1P53783 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox1P53783 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox1P53783 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox1P53783 AC165080.3-201ENSMUST00000217162 3116 ntBASIC5.98□□□□□ -1.45
Sox1P53783 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Sox1P53783 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Sox1P53783 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox1P53783 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sox1P53783 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Sox1P53783 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox1P53783 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox1P53783 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sox1P53783 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Sox1P53783 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Sox1P53783 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sox1P53783 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.97□□□□□ -1.45
Sox1P53783 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sox1P53783 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Sox1P53783 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.97□□□□□ -1.45
Sox1P53783 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sox1P53783 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox1P53783 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sox1P53783 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.97□□□□□ -1.45
Sox1P53783 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Gm14897-201ENSMUST00000118213 207 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Gm12935-201ENSMUST00000119352 246 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Gm14605-201ENSMUST00000120599 268 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Gm3084-201ENSMUST00000169967 598 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Sox1P53783 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Gm22857-201ENSMUST00000174969 134 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Mir6400-201ENSMUST00000184870 92 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.97□□□□□ -1.45
Sox1P53783 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.97□□□□□ -1.45
Sox1P53783 Gm3841-201ENSMUST00000191399 451 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Gm37164-201ENSMUST00000192809 637 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Gm43078-201ENSMUST00000197222 168 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Gm43929-201ENSMUST00000203025 409 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Gm45405-201ENSMUST00000211544 609 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.97□□□□□ -1.45
Sox1P53783 AC162931.1-201ENSMUST00000214184 267 ntBASIC5.97□□□□□ -1.45
Sox1P53783 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.97□□□□□ -1.45
Sox1P53783 Gm2436-201ENSMUST00000219562 774 ntBASIC5.97□□□□□ -1.45
Sox1P53783 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Sox1P53783 Olfr1193-201ENSMUST00000081697 957 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox1P53783 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.97□□□□□ -1.45
Sox1P53783 Gm43483-201ENSMUST00000196724 2860 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.97□□□□□ -1.45
Sox1P53783 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
Sox1P53783 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox1P53783 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sox1P53783 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Sox1P53783 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sox1P53783 Gm20172-201ENSMUST00000193138 1551 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sox1P53783 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sox1P53783 Gm44708-201ENSMUST00000205580 2237 ntBASIC5.97□□□□□ -1.45
Sox1P53783 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Sox1P53783 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Sox1P53783 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
Sox1P53783 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Sox1P53783 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.96□□□□□ -1.45
Sox1P53783 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox1P53783 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Sox1P53783 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox1P53783 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Sox1P53783 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox1P53783 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Sox1P53783 Gm24275-201ENSMUST00000116780 146 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Gm14909-201ENSMUST00000117853 351 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Gm6923-201ENSMUST00000118343 406 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Gm13503-201ENSMUST00000119017 446 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Gm12190-201ENSMUST00000120001 187 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.96□□□□□ -1.46
Sox1P53783 Gm13356-201ENSMUST00000121678 335 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Gm25278-201ENSMUST00000157267 120 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms